| Id Trinity | FTRINITY_DN59241_c1_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_14793 |
| Sequence | GTTAAATCAAACCATATATTTATGTTCAGTTTGATCACTATAGCAAAAATCGAACCAAACCAAACTTCTGCACGGAAATATAAAGCTCCGTACATTGACC GATGAGTAAGTTAGCCTAGATGTTTCCAGCTCGGATATGATTGCCGCATCCGGCGAGCCCGTACATTTATAACATGACTTAACAGAATCTCTCTTAAAAT CAACATTACTTCCAATTTCACTTTCTCTCTATATATCTTCCTTCAATTTGATTCTGCAACTTACCAAAACCCTAGATCGCTATTCCCCCATCATATACCC GCAATCGACTCTCTTATCCGGTACAATTCATCGGGGAGGAGATAGGTTGTTGAGACCATTCTGCTTCTTATTCCGAATTCGAAATCGAAATCTGACAGCT GGACGAAGCAAGAAATGGATCCTGCTGGTCGCTATGGTCCGCGTCAAGGCTGGGATAATAACAACAGCGCTCTTGAGGGTTACGCTGAGGTCCGTGAGCC AAATTTTCGGGTTGGAGGATCTTATGATGAACGTCGCTTTATAGATGAAAAATATCCAAGGGATGGCACATACCAGAGAAATAATTTCCATCGCGACATT TTGGACGGGGAATCCTATCTGCCACCAGGATCTGTTGCTGGACACTGGAGCCAGTCCAAACGGAGAGGTTATGATGAAGATTATCCACTCAACAAGGAAT CCAGACGTTTTCAGAGGCCGTATCATGAATCATATAATCATGTTAATGCTTTAAGGGACCGTGAAATTGAGACATACCCACCATATGATAAGTTTCGTGA TGGCTATGGTAGCATTGATAACTACGGTGATCGAGGATATGATAAACCTGACAGGTTTGCAGGATCTGACCATAATGATTATGAGTATGATGATTATGGC TACAAGTCTCGTCTTACTCATCATCGTAGGGAGGATAGCCATGAGAGGGATTATGATCATGGTCGTCATAGTTATGATTCTGAATATGAAGGAGGTAGTA GAAGAGATAATAATCGGAGGCGGCGGGAATCCCGTGATCGGGAACGTGAGAGTAGAGATATTAGCCGGGAAAGGGATTTGAGTCCACGTAGGAGGCATGA GCGTTCCCGTTCTCGATCACGGTCTGAATCCAATTCCCGTTCCCGTTCCCTTTCTCGTTCCCATTCCCAATCTGGTGGATATGATTATGATGATCATCCA AGATCAAAGTCCCCTCGAGGTCGAAGCCATAGCCGAAGTTATCGAGAAGACAGCTATGTTGACAGTCAATATGATAGAAGTGAAAGACGTAGGGATCGTG AGGACAAGCATCAGCATGAACATTATTCCGTGGCTCCAACTCCAGCTATTGTTGTGAAGGGTCTTTCACAGAAGACGACTGAAGAATATCTATACCAAAT CCTTGCGGAATGGGGTCCCCTTCGTCATGTTCGCATTATAAAGGAGAGAAATTCTGGCATCTCTAGAGGATTTGCATTTATTGATTTTCCTTCTGTGGGA GCTGCACAAGCAATGATGGAAAAACTAGGAGACGATGGTCTTGTCGTGGATGGGAGAAAGCTTTTCTTTGAATATAGTAAGCCAACTGGAGGTCCAGGTC CTGATGTAGCTATTAAATCTGGTCATAATCATAAGATGATTACAGTACCATCTGATTGGATATGCACTATATGTGGCTACATCAATTTTGCACGCCGGAG TTCATGCTATCAGTGTAACGAGCCACGGACTGAGGATGCTCCTGCAGCAGCTATTTCATCATCAAATTCAACATTCTTCGGAAGGAAAGGTTTGGAGGCA GGTCCAACTCATGTTTTGGTTGTCCGCGGATTGGATGAAAATGCTGATGAGGAGATGCTTCGCTATGAGTTTTCCAAACATGCTCCAATTAAGGATCTGC GTCTTGTGAGGGACAAGTTCACTCATGTGTCAAGGGGATTTGCATTTGTACACTTTCATTCGGTGGATGATGCTACGAAAGCTCTTGAGGCAACAAATGG AACAACTCTTGAGAAGAATGGGCAAATTCTAAGAGTAGCATATGCAAAAAGTATCCTGGGCCCTGGATCAGGAACTTCCCAATCGAGCAGTCTTGCAGCT GCTGCGATCGAGGCTGCAACATTTGCTCAACAGTATGATACCGTGGGATGGGCTCCAAAAGAATATAATCCAGATGACAAACAATTTGCTGGTCCAGAGC AAACTGGCACCGAAGTTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCAGGTTATTACTACGATGCTGCTTCTGGGTTTTACTATGATGGGAA TACTGGTCTGTACTATGATGGTAATAATGGGATTTGGTATTCATATGACAACCAAACTCAGCAGTATATCCCTTGCACTGACCAAAATCAGAATAAAACA GATAATAACCCGTCTGAACCTTCCAAAGCATCTGATGGTTCCAGCAGTAAAAAAGTGGTGATTTCGGCACCAGCAATTACCGTCGCATCAGTTGAGAAGC CAGCTTCGTTGGCAGATGCTGTCCAGGCTGCAGCAGCAGCTGCTTTAGCTGCAGAGAAGAAAGAAAAAGAAAAATCAAAGGAGATAAAGCTTTCCTCAAA AAGCAGTATTCTGGCGAACAAGAAAAAAATAAACAATGTGTTGACAATGTGGAAGCAGAGGAGCCATGAGGGGCGGACTACTCGAGTGGCTCTGGAAGAT AATCAGCTCTCTATTTCAGCTGATGATAGACATTCTTCAGGACATTCTGTAAAGAACAAATTAAAAAGTGAGACTGCGGCAAGGGAAAGTAATGCATCTA CTATGGGAGTTCACACAAGTGTTAACCAGGCCATTGCTTTGGATCCTCAGTCACAGCCCCGACCAGTTAGTAATAGCCTTGGGGGCACTCTGATGGGGGT TATAAGGGGCTCGGGAAGAGGGGTTGTTAAATCAGATACTTCTTATTCCGGTTCTGCAGCTGCCACATCATCTATGTCAAGTTCATTTTCAGCAAATTTT GATGCACAGACAATTTCTACTCCCTTTAAGACAGATGTCTCTGCCTTGAGTTCACATTCACCATCTGTGGCTTCTGTAAGTGGCAGGCGAAGGTTTTCAG AAATGCCCCATTCTGCTTCAAATAACAAGGAACAATCTCAAACAACCTACAGGGATCGCGCAGCTGAGAGGAGAAATTTGTATGGCTCGTCATCTTCAGT TGGGAATGATTTGGCTGACCTTGAAATTGGGGATTCAAGTAAGTCTGCTTACTTTTTTAATGGGTATCTTTCCTTGAGTTCAACCTATTGTACAATTGTT GAGGTAATAATATTTGCTTGACAGTTATTAAATTATTTCGAAACACTGTCCCGTGCCCACCGAAAAGCTCTGGGAGTAGAGGAAGCCGTAGTTTTACATT AGGGGTTAAGTAAGACCTTGGCATCTGAGTGTAGAATTGGTATTTTTTTTATTTCTTTTGTTCTTCTGATGGAAAGTAAGTAAATCTCTGGGGTAAGGAA ATGAAACTTAATTAGATGTGTTTTTTTTCGGTAAAATATAAATAGAACTATCATTTCTTCCAACTCTGTAAATGATTTCTGGTTTGTTCCAGCTAGGAGA AAGGGATTTGAGTCTAGTATTTGCCCCGCTTCTCCTAAAGACAATTTACTTTTTGAAAATTCAAATAGCCGAATAGTAAGTGTTCACCTTTCTACGTCGC TGGTAAATTTCTATCTCTGACAATGTGGATTGATTTTTGAAAAAAACAAATCTGCGATCTTAAAGATCGAGAATTTGCATCAAGGAAGGGTGATCCGATG CCTTTCCCTCCTGGAGTTGGTGGAGGACGAGTGGTTGGAGATGTCAACCTTGATACTTATGAGGTGATTACGGCAGACAAAGCGATTGATGAAAGCAATG TTGGCAATCGGATGCTTCGCAACATGGGATGGCAAGAAGGCTTGGGACTTGGAAAGGATGGAAGTGGAATGGTAGAGCCAGTGAAGGCAGAAGGAATGGA GAAAAGAGCAGGACTTGGGAGTCAGCAGCAGAAGAAGTTGGATCCTAGCCTGGAGGTGCAGGCAGGGGATAGTTACAAGATGCTTATTCATAAAAAAGCA CTTGCCAGATTTAGGGAAATGTAAGATTTTGTTATGCTCTTATTGTACAAGTGCTTTTGCTATTTTCAATTTGAAAATTTGTCAATTTGTTAATTTATGA TCAAATCTGCATATCTTCTTTTGTTGTACTCTGGAGATGTTTTGGAATAATATTGTTCTTGCTCTGTCAATAGTTATCCCTTTGTTTTTTTTGGTATTAG TAAGGGTATGTCTAACCTTTTTGGATAAGGAACTAATCTCTTCCGAGTTTGTGGTCGACCCTTCCAACAAGTATCATTCCCAGGAATTGAACCTTTGATC TTGGGGATCCAAGAGTCTTACACCATTAGACGAACGTTTTGTTGTCTATGTTTCTATCCTTTTATTATTATTTTGGTGAGTGTGGCCATCAAAAGTCACA TTTGGTTTTGGTTTTCTCCTGTTACATATTTCTAAAGGGATTCTTGCTAGAAAGAGATGGCCAAAGGGTTTGACTATTGGGACATTTTACAATGAAATAT TTATGCACTGTTAGCATAAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84194; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_14793
| Blastp | SUPPRESSOR OF ABI3-5 from Arabidopsis with 52.97% of identity |
|---|---|
| Blastx | SUPPRESSOR OF ABI3-5 from Arabidopsis with 57.7% of identity |
| Eggnog | RNA binding motif protein(ENOG410YNFQ) |
| Kegg | Link to kegg annotations (AT3G54230) |
| CantataDB | Link to cantataDB annotations (CNT0001316) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446987.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |