Id Trinity | FTRINITY_DN59241_c1_g2_i5 |
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Name Transcript | Ll_transcript_14797 |
Sequence | GTTAAATCAAACCATATATTTATGTTCAGTTTGATCACTATAGCAAAAATCGAACCAAACCAAACTTCTGCACGGAAATATAAAGCTCCGTACATTGACC GATGAGTAAGTTAGCCTAGATGTTTCCAGCTCGGATATGATTGCCGCATCCGGCGAGCCCGTACATTTATAACATGACTTAACAGAATCTCTCTTAAAAT CAACATTACTTCCAATTTCACTTTCTCTCTATATATCTTCCTTCAATTTGATTCTGCAACTTACCAAAACCCTAGATCGCTATTCCCCCATCATATACCC GCAATCGACTCTCTTATCCGGTACAATTCATCGGGGAGGAGATAGGTTGTTGAGACCATTCTGCTTCTTATTCCGAATTCGAAATCGAAATCTGACAGCT GGACGAAGCAAGAAATGGATCCTGCTGGTCGCTATGGTCCGCGTCAAGGCTGGGATAATAACAACAGCGTAATTGTGGTTTCCTCCTTAAATAAATTCAA ACCTATAATGGGGATGAATGAATCATTATTCAAAGAAACTTTTTGGGGTGGGGGAATGAATGAATGAATGAATGAATGTCATCCTTAGAAAGAAAGCTAG CTAGCTGTGGGGGCAATCAGGATATGATATGGACGGGATTTCCCTAACCTCATCTCGTCATTGATTATTTCTTCCTGACATACCTTATTCTCTTGAATGC ACAGGCTCTTGAGGGTTACGCTGAGGTCCGTGAGCCAAATTTTCGGGTTGGAGGATCTTATGATGAACGTCGCTTTATAGATGAAAAATATCCAAGGGAT GGCACATACCAGAGAAATAATTTCCATCGCGACATTTTGGACGGGGAATCCTATCTGCCACCAGGATCTGTTGCTGGACACTGGAGCCAGTCCAAACGGA GAGGTTATGATGAAGATTATCCACTCAACAAGGAATCCAGACGTTTTCAGAGGCCGTATCATGAATCATATAATCATGTTAATGCTTTAAGGGACCGTGA AATTGAGACATACCCACCATATGATAAGTTTCGTGATGGCTATGGTAGCATTGATAACTACGGTGATCGAGGATATGATAAACCTGACAGGTTTGCAGGA TCTGACCATAATGATTATGAGTATGATGATTATGGCTACAAGTCTCGTCTTACTCATCATCGTAGGGAGGATAGCCATGAGAGGGATTATGATCATGGTC GTCATAGTTATGATTCTGAATATGAAGGAGGTAGTAGAAGAGATAATAATCGGAAGCAGCGTGAATCCCGTGATCGGGAACGTGATAAAAGAGATCTTAG TCGGGAAAAGGATTTGAGTCCACATAGGAGGCATGAGCGTTCTCGTTCCCGTTCTCGATCTCCATCACGGTCCCAATCCAATTCCCGTTCCCTTTCCCGT TCCCAGTCTCGTGGATATGATTATGATGATCATCCACGATCAAAATCCCCTCGAGGTCGAAGCCATGGCCGAAGTTATCGAGAAGACAGCTATGTTGACA GTAGATATGATAGAAGTGAAAGACATAGGGATCGTGATGACAAACATCAGCGTGAACATTATTCTGTGGCTCCGTCTGCAACTATTGTTGTTAAAGGTCT TTCACAGAAGACGACTGAAGAAGATCTATACCAAATCCTTGCGGAATGGGGTCCCCTTCGTCATGTCCGTGTTATAAAGGAGAGAAATTCTGGCATCTCT CGCGGATTTGCATTTATTGATTTTCCTTATGTGGGAGCTGCACAAGGAATGATGGAAAAACTAGGAGATGATGGTCTTATTGTGGATGGCAGAAAGCTTT TCTTTGAATACAGTAGTAAGCCAACTGGAGGTCCAGGTCAAGATGGAGCTATAAAATCAGGTCATAATCATAAGAGCATTACATTACCATCTGATTGGAT ATGCACTATATGTGGCTACATCAATTTTGCACGTCGGACTTCCTGCTACCAGTGTAATGATCCACGAACAGAGGATGCTCCTGCAGCAGATATTTCATCA TCAAATTCAACTGCCTTAGGAAAGAAAGGTTTGGAGGCAGGTCCGACTCATGTTTTGGTTGTCCGTGGATTGGATGAAAATGCTGATGAGGGGATGCTCC GCTATGAGTTTTCCAAACATGCTCCTATTAAGGATCTGCGTCTTGTCAGGGACAAGTTTACTCATGTCTCAAGGGGATTTGCATTTGTACATTTTCATTC GGTGGAGGATGCTACCAAAGCTCTTGCGGCAACAAATGGAACAACCCTCGAGAGGAATGGACAAATTCTAAGAGTAGCATATGCAAAAAGTATCGTGGGC CCTGGATCAGGAGCTTCCCAATCGAGCAGTCTTGCAGCTGCTGCTATTGAGGCTGCAACATTTTCTCAACAGTATGATACTGTGGGATGGGCTCCAAAAG AATATAACCCAGATGACAAACAATCTGCTGGTCCAGAGCAAACTGGCACCGAAGTTGGTGCTCCACAATCAGGCTTTGTTTGGGATGAAGCATCGGGTTA TTACTATGATGCTGCTTCTGGGTTTTACTATGATGGGAACACTGGTCTGTATTATGATGGTAATAATGGGATTTGGTATTCATATGACAATCAAACTCAG CAGTACATCCCTTGCACTGACCAAAATCAGAATAAAACAGCTAATAACCTCTCTGAACCATCCAAAGCATCTGATGGTTCCAGCAGTAAAAAGGTGGTGA TTTCTGCGACAGCAACTACCGTTGCATCAGTTGAGAAGCCAGCTTCGTTGGCAGATGCTGTCCAGGCTGCAGCAGCAGCTGCTTTAGCTGCAGAGAAGAA AGAAAAAGAAAAATCAAAGGAGATAAAACTTGCCTCAAAAAGCAGTATTCTGGCAAACAAGAAGAAAATGAACAATGTGTTGACAATGTGGAAGCAGAGG AGCCATGAGGGGCAGACTACTCGAGTGGCTCTTGAAGATAATCAACTCTCTGTTTCAGCTGATGATAAATATTCTTCAGGACATTCTGCAAAGAATAAGT TAAAAAATGAGCCTATAGCAAGGGAAAGTAATGCATCATCTACTTTGGGAATTCACACAAGTGTTACCCAGGCTGTTGCTTTCGATTCTCAGCCTCAGTC CCGGCCAGTTAGTAATAGCCTTGGGGGATCTTTGATGGGGGTTATAAGGGGCTCGGGAAGAGGGGTTGTTAAATCAGATACTTATTCGGGTTCTTCAGCT GTCGCATCATCTATGTCAGGTTCTTTAGCAAACGTTGTTGCACAGACAACTTCAACTCCCTTTAGAACAGATGTCTCTGCCTTGAGTTCACATACACCAT CTGTGGCTTCTATAAGTGGCAGAAGAAGGTTTTCAGAAATGCCCAGTTCTGCTTCAACTCACAAGGAACAATCTCAAACAACCTACAGGGATCGTGCAGC TGAGAGGAGAAGTTTGTATGGCTCGTCGTCTTCAGTTGGGAATGATATGTCTGACCTTGAAATTGGGGGTTCAAATCGAGAATTTGCACCGAGGAAGGGG GATCCGATGCCTTTCCCTCCCGGGGTTGGTGGAGGACGTGTGGTTGGAGATGTCAACCTTGATACTT BLAST |
Tissue | flowers |
Gene name | LI_gene_84194; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_14797
Blastp | SUPPRESSOR OF ABI3-5 from Arabidopsis with 56.49% of identity |
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Blastx | SUPPRESSOR OF ABI3-5 from Arabidopsis with 58.42% of identity |
Eggnog | RNA binding motif protein(ENOG410YNFQ) |
Kegg | Link to kegg annotations (AT3G54230) |
CantataDB | Link to cantataDB annotations (CNT0001316) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423246.1) |
Pfam | Zn-finger in Ran binding protein and others (PF00641.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |