| Id Trinity | FTRINITY_DN59247_c1_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_15882 |
| Sequence | GCGGGATTAGTGATGATAAAGACTATGGTACAACACATTTACGTCGTCATAGAGGAAGATGTACCAAAATAAGACATGATGATATTGGTCAAATAGTTAT GGATAAGGAAGGAAAATTGACGCCTCGAAAGATTGATCAAATGGTTGTACGTGACATGTTAGCTGCTGCAATTATTGAACATCCTTTTAAATTTGTTGAG TTTAAGAAGATTAGATGCTTAATTAACTACTTGAGTTTAGATTTTATTCCTGTTTCGAGAAATAAGACTAAGACTGATCTCATGGTAATCTATATGATAG AAAAAGTTAAGCTTATAAAAGGGATGTCTAGCATTCCTACTAGGATATCTCTAACTTCTGATTTATAGACAGCTTGTACAACTGAGGGTTATATTTGTTT GACTGCTCATTATGTTAATTCAAATTGGAAGTTAGCAAGTAAAGTTATTAACTTTTGTCACATGTCTCCCCCTCGTACTGGATCTGAATTGTCTAAGAAG ATACTTGAATTTTTGAATGAATGGGGTATAGACAAAAATATTTTTTCTCTAACTTTAGATAATGTTTCCTCTAATGATGTCATGCAAGAGCAATTAAAAA ATAAGCTTATTGTGGAAAACTCATTGTTATGTGATGGACAATTATTTCTTGTGCGTTGTTCTGCACACATATTGAATATACTTGTTCAAGAGGGGTTGAA GGTAGCTAGTGATAACTTATATAAAATCAGGGACAGCATCAAGTGTGTGAGAGGTTCAGAAGGTAGAATGCTCAAATTGATGGTATGTATTGAGAAGATA GGTGGTGTTGATGCTTCTATTGACTTGTGTCTAGATGTTCCTACTGGGTGAAACTTTACTTATTTGATGCTTGAATTTGCTCTTATATATAAGCATGTAT TTGAAAAACTCCACATGTATGATGATAATTACAGATTTTCTACTTCGGTAGAAGAGTAGAAAAGAGCAGATAATCTATGTGTTTTTGTTGCCTTTCTAGC GTACCACAAACTTGATTTTTGGCACATCTTATCCTACTTCCAACTTGTATTTTATGCAAGTTTGGAAAATTCAATGTCTACTCTTTAATACTTTAAGAGA TGAAGATGAAGTTTTGAGGAGCATGACTAATAAGATGGTTAAGAAGTTTGAGAAATATTGGGATGATTATAGTATTGTGCTGGCTATGGGGGCAATTCTT GACCCAAGAGTGAAGTTGGAGACATTGAATTATTGTTTTGAAAGAGTTGATGATTCTACTTTTGAGACAAAGTTGCAGCTAGTTAAGAAAAAGTTGTACA TGTTATTTGAACAATGTCGTAACACAAGCGCTCCTACTTCTATGCAAACTCTGACTTCTGATGCTTCTCAAAAGAAGGCTAAAGTTCAAGATTTAGACTA TATGTTTGATGAACTCGATAGGCACAAGACGCAACTTGCAACAAAAATGGAAAAGACACAATTTGATCTTTATTTGGAGGAGATATCTTTAAATTTTAAA GATAATAATGATTTGGGTGTGCTAAAGTGGTGGAAAGAAAATAAAAATCGATTACAGAGCTATCAATCATGGCTAGTGACTTGCTTTGCATTCCTATTAC AACTGTTGCATCTGAATCTGCATTTAGCATTGGTTCACATGTTCTTAACAAGTATAGAAGTCGACTTTTATCAAAAAATGTGGAAGCTTTGATTTGTGCT CGGAATTGGGTGAATGGTTTTGTTTGTGAAGATGATAAAGAAGAAGATTTCAAAGACGTTGACGGTGATAATAATAGAAAAGTGGATGCATCTTCTTTAG AATTTACAAGTTTTAAGCTAAGATGTTATGTTGTTATTGTAATATTGTAGACTTATGTTTGTGATTTTTTGTTTTAAAAGACATTTATCAAGTTTGTTGA TTATTTTTTGTCTAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_15882
| Blastp | Zinc finger BED domain-containing protein RICESLEEPER 1 from Oryza sativa with 27.12% of identity |
|---|---|
| Blastx | Zinc finger BED domain-containing protein RICESLEEPER 2 from Oryza sativa with 33.52% of identity |
| Eggnog | transposon protein(ENOG410Y37V) |
| Kegg | Link to kegg annotations (9267589) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414580.1) |
| Pfam | Domain of unknown function (DUF4413) (PF14372.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |