| Id Trinity | FTRINITY_DN59251_c4_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_16460 |
| Sequence | ACCACGCATTGAACAATGCTTAAAATTACCTATTCAAACTAATGAACAATTTCAGGTTCTTGTTGGGAACGGTAGCTCCTTGACTTCGCACGGTTTCATA GCTGACTTACCCGTGACTATTCAAGGAAATTTGCTGCACTTGCCTGTTTATTTGCTATCTATAACATGTGCTGATTTGGTGCTAGGGGCACCTTGGTTAA AAACTCTTGGCCCACACATAGCAGATTACAATGCTTTATCCATCAAATTTTATATCCAAAACACATTTATTACCCTATATGGGGATCAAATGCAAGGTAC TAATCAAGCTCAGTTTCACCATATTAAGCGCCTGCAGCGTACTCACTCTATTATGGCCTCTTATACTCTTCAATTTCAGCAAGTTCTCCCTGATGATGTT TCTTTACCTGCAGACTTACATCCAGACTTGACAGCATTAATTAGGCAATATCTGGATCTGTTTTCTGAACCGGCAGGTCTCCCTCCAGCCCGGTTTCAAG ATCATGCTATCACACTAATAGCAGGCAGCAACCCTGTCAAGGTTAGGCCATACCGTTATCCTCATAGTCAGAAGGCACAAATTGAAACTATGGTTAAGGA TATGTTGTCCCAGGGTATCATACAACCCAGCAATAGCCCTTTTTCATCCCCGGTTCTCCTTGTCAAGAAAAAGGACGGGTCTTGGCCGTTTTGTACAGAT TATAGGGCCTTAAATGCTATTACGGTCAAAGACAGTTTTCCCATCCCTACTGTTGATGAATTATTGGACGAATTATGTGGTGCTCAATACTTTTCCAAAC TTGACTTGCGTTCCGGCTACCACAAAATTCTGGTTAAACCGGAGGATAGGCACAAAACCGCTTTTCGCACACATCATGGTCTCTACGAATGGCTAGTAAT GCCTTTCGGTTTGTCCAACGCACCTGCCTCGTTTCAGAGCTTGATGAATGATGTTTTTCACGCTCAACTTCGTAAATCAGTGCTCGTTTTCTTCGACGAT ATATTGGTTTATAGCCCGTGTTGGTCATCTCATTTAATACATTTGCATGCGGTTTTACAGCTGATGCGTCAACACTCTCTCTTTGCAAAGATGTCCAAGT GTTGTTTTGGCTTTACTATAGTTGACTATTTGGGTCACACCATATCCAGTACCGGCGTTCACATGGATAACACAAAAATCCAAGCAGTCTTGGAGTGGCC GATTCCAAATAATTTGAAACAACTTCGAGTTTTTTTGGGCCTATCTGGTTACTATAGGCGCTTTATTCGAAACTATGCTACCATTGCTTCTCCATTGACT GCACAATGTTGTCGCCGATGCTTTATCTCGATCATTTTTTATGGCCCTCTCTGGCCCTACAAATTCCCTGCTGCCGGTTATTAATGTTGCTGTCAATGCA GATGCGAAATTATTTGCTCTGAAACAACAATGTAGACAAGGTCACTGCATTGATCCATACTACCAAGTCAAAAATGATGTGCTGCTCTGGAAAAATCGTG TGGTTGTACCCTCTCTTCCCCATCTGATTCATTCAATTTTGGAAGAATTTCATTCCTCTATTTTAGGGGGACACTCTGGGATAGCCCGCACTAAAGCAAG AATTGCAGCTCAGTTCACTTGGTCTTCAATGTCTAAGGACATTAACTCCTTTATTGCCAACTGCTTGGTGTGCCAACAAGCTAAAGCTTCCACAGCAGTG CCTGCAGGTCTGCTACAACCACTGCCCATTCCGTCCCAAATTTGGGAAGATGTTTCCATGGATTTTATCACGGGTCTTCCTCCTTCTAACAGTTTTATGG TCATAATGGTAGTGGTGGATCGACTTTCAAAATATAGTCATTTTGCACCGCTAAAGGCTGACTATACTAGTCAGAAAGTGGCTGAAACTTTTTTGCACCA CATTGTTAAATTGCATGGATTTCCAAGAAGCATTGTTTCAGACAGGGACAAAGTTTTTACTAGTGCATTTTGGCAGCATTTATTCAAACTAAGTGGTACC ACACTTTCTATGAGCTCGGCTTATCATGCTCAAACGGATGGTCAATCAGAAGCGGTTAATAAATGCCTTGAGATGTATTTACGATGTTTTGCAGGACAAG TTCCTTGTAAATGGTCTAAGTTGTTAGATTGGACTGAGTTTTGGTATAACTCTTCCTTCCAAACTAGCATTGGCATGACACCCTTTAAAGTCGTGTATGG TCGTGATCCCCCTACCTTGCTCAAGTATGATCCGGCAATCATTGAGCCCCCTTCACTCCAATCATTATTAGCCGAGAGGGATACCACATTGCAGCTTCTT AAAGATAATCTGCTACGTGCTCAACAGAAAATGAAGCATTTTGCTGATTCCAAGCGAAGACATCTAGAGTTTAAAATCGGTGATATGCTTCTAGTTAAAC TTCAACCTTATCGACAACATTCAGTGTCTTTGCATCAGAACCAAAAGTTGGGGTTACGCTACTTTGGACCTTTTCCCATCATTGAGAAAATAGGTGTTGT GGCCTACAAAGTGTTACTGCCTCCATCCGCAAAGATTCATCCAGTGTTTCATATTGCTAATCTGAAACTGTGCAAGGAAGATCATCCAACTCAGTACATG CCTCTACCGTTAATAACTACTGAAGCCGGTCCGGTGTTAGTTCCTCTTACTGTGTTGGACACCAGAATTTTGCTACAACAAGGTCAAGAGACACCTCAAT TCTGGTACAGTGGCAGCATTTGCCTCTTGCAGAGGCTACTTGGGAAAACTATGAGGCCTTGCGAGCCTTGTATCCGAATTTTCACCTTGAGGACAAGGTG AGTTTTAAAGTAGGGGGTGATGTTATGAATAAGGATGATTACAACAAAACCACAATGATAACACATGAGCAAAGACACGTGGCACAAGATCCAGCTAGCA AGGAAATTAGGAAGAGCATGAGAGAGAAGTTTCCTAACAGAAATATTCCTTGGACTTTGTTAAATAGATCAGGGAATGGAATGAATGAGGAGCAAAAAAA GAAGATGATGCAATCTCTCTCTCTAATTCTCTGCACCTCCCAATCTATTGGCTTTCTAAATTTTCTTCATTGTAAATTCAGTTTTCCCTAAAGAAATTGT ACTGAATGCTTATGATATAAAGTACACTTTTCCCTCTGAGAATTTTATTTCTTCTGCTACCAGTAACTACATACCATTTGGTGCTTTCATTTTCTTACTC ATGGCTGATAACACTATGATGAAAGGGTTGGAAGCTGCTATCAAAGATCTGACCACTACGTTGCAGCAAATGCGTGACGAGTCTGACAAAAGGCACAATG AATATATGCATACACGTCACCTTGACCAGGCCCATTTCGATCGTGTGGAGAACCAGATGACCTTATTGCATGTTTCTCAGTCTTCGGCAGTGGCTCTCGT TCAGGAAACTCTTCACCACAGTCATTTCAGGTGCACAATATTAAGCTTGATTTTCCCAGATTTGATGGATCTGAGATCAGAAATTGGATTTTCAAGGCTG AACAATTCTTTGATTATTATCCCACTCCTGATAATCAACGTCTTATTATTGTTGCGGTTCATATGGAGAAGGATGTTGTTCCTTGGTTTCAAATGTTATC TCGCACTCGTCCATTCCAATCCTGGGCTCTGTTTACCCGTGCTTTAGAAATGGAATTTGGGCCCTCTGAATTTGAATCCCCACGTCCTTCACTTTTTAAA CTTAACCAAACAACCACTGTCTCCGATTATTACACAACTTTCATCGCCCTGGCCAATAGAGTAGATGGTATTAGCGCTGAAGCTATGCTTGACTGTTTTA TCAGTGGATTACACCCCGATCTTAAGCGTGAGGTCATTGCTCAATCACCATTATCACTCTCCAAAGTTGTGGCACTGGCTAAACTATTTGAAGAAAAATA CCTTCCCCTCACACCTAAGACAGCCGAAACCTCATCTTTCAAACCATATCATTTTGCCAAACCCACAAAACCCTCACCCTTACCTCCTTTACCACCTAAT CCCACTCCGAAACCTCCATACCCACCACCCAAATCCAACCCTGTCAAACATATTACCCGCGCTGAAATGCAACTACGACGTGACAAGGGTTTATGCTACT ATTGTGACGATAAATTCTCCCTTTCGCACAAATGTCCGAATCGGCATTTCTTGCTACTTCAACTTGATGAGTCGGAGGAACCATCTCAATTAATTGCACA ACCAGATTTACCGGCAATAGATGCTGACCCACCAGAGGCTTCTGAACACCACCTGTCCTTCAATGCGTTAAATGGGTCCCATGGTGCAGGAACAATGCGT TTTCAGGGCACTATTCAAGGTATGAAGGTTAGTGTCCTATTGGATAGTGGAAGCTCTGACAACTGCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84279; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16460
| Blastp | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 34.58% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 40.12% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YGR109W-B) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017411729.1) |
| Pfam | Integrase core domain (PF00665.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |