| Id Trinity | FTRINITY_DN59288_c2_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_14858 |
| Sequence | TTATATAAAATCATAACAATTAAAATTTTTATTTTACCATATGTCATAATCATATATTGTAATGGACTCTCAGAGAGATCCCCATCCTTCTCAATTGGTC AAGCCAATATATGCAAACTGAAAAGCTGCAATGATAAGAAATATGAGAGGAGCTATTATCGACCTTTGATGTTCTTTTGCAATATGCAAGGCGAAGTAAA GTCCCCTCTAATGCATCACCTTCCATAGGCCACCAAGTTATTGGTTTTCTGAGGTTATTTTGTTTACTTTTCATAGGGAAACAATTTTGAGAATAAAATA TTTTATGATATAATGAGATAAATTATTTGGTCCTATCAGTAAAATCATGTATACTGTTTTATTATTTTTTATAAAAAAAATTGTAATGCTAAATAAAATA ATACACATGTCATACTTTTATTAGTTATTGGAAATAAGTTATATCTTGGTACAGGTAGATATATTATTTTCAACAATGTTATAGTGTGGCCTCGTTTATA TTATCAAAAGTGAAGCTAAAAAATGTTTATTTTCACCCTGTCTGGATTATCTTGATTTGAGGTTGCTGAGTTATGGTTTTAGCAAAATTGATTATAAGTT TGGACCTATCCTACTTCATATCCGTAAAGAAAAGAAGAAAACCGCGTGGATGAGCCCAAAATCATATACCAATTACCAAGAGAATATAACTAACCCAATC CAAAAGTGTGATTTTCAGGAAAAAGATATCATAAACATGATTTTACCAAGGTAACCTTCAGGTGAACCACCCCAACTTCGCGTGGCGCGTTCATTACAAT TCCCTGGCATTTTCGTAAAACCATGAAATCATTCAAAGCCCACAATGGTCTATTTTCATCCAATAGAGCAAACCCACCCCACGTGTACACAACGCGCTCT TTCAAACTAGGAAGTGAAACAAAAGGGATTCACTCTTTCAGTCTTTCTCAATTTTCACACACAAAGGAAATACAAGTGCGAAGTGAGGCAAGTACAAGAA CAAATAACGCGATAACACACGGATCGATGACATGGCATAAGATTTTTTGTTATCCCGCGTAAACCTGGACTTGAACCTATCGCGATTCAATTCTAATTTT CATATTTTGGTGTTCCCCTTCTTATCCCTCCCCAAAGCTCAACGCAACCACGTTCTCTCTCTGCTTATAACATTCCCTCTTTCACAACCCTAACTCAAAA ACACTTTGCAACGAACACCATGCCGAAAGCAAGTTCTGATGCCAAAGCCTCTGATAATCTGTTGAAGCGCAAGGGCGCTGGAACCGGGAGGAAGCAAAAG AAGAAAGCTGCTAAGGATCCAAACAAGCCTAAGAGGCCTCCAAGCGCTTTCTTCGTTTTCATGGCTGAGTTCAGAGAACAGTTTAAAAAGGAGAATCCAA ACAACAAATCTGTCGCCGCTGTTGGCAAAGCTTGTGGTAGTAAATGGAAAGCAATGACTGATGCTGACAAAGCTCCATACATTGCTAAGGCAGAGAAGAA GAAAGAGGAGTATGAGAAAACTCTTCGTGCCTACACTAATGGATTGGCTACCGGCAAAGATGGAGAGGAGTCTGACAAGTCGAAGTCTGAAGTGAATGAT GATGACCAGGATGATGAGGAGGAAGATGATGAGTAGAGAGATTAAAGGAAGAAGCTTATAATAACCTGAATAAAATTATCATTTTGGACAGTTTAGCTTA GAAGTTGCCAATTTAGTTGGTGATTCACACTTCTTAGTTGTAGATTAGTTTCTAATTCTAATTAGGTTTAATTTCATGATATGTTAATTTCTATTTTTCT AATATCAAACTAGTAGAAACTCAGTTGCTATCATACTTCTACATCACCGATGAGGTGTTGGCATTGTATTCAGGTTATTTTTATTGAAATGCCATGGGTC CTGAATGTCGGTTTATATATCTTGATAATTGTGTCTGTTTTTGTTGATGAAATGTCCTTCAACTGACCCATATAACATCTTTTAATATGCATTCATACAT TATTTTTGGATGAGCAATAAGCTTTAATTCTAATTACTAGTGACTGGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84696; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_14858
| Blastp | High mobility group B protein 4 from Arabidopsis with 57.04% of identity |
|---|---|
| Blastx | HMG1/2-like protein from Vicia with 71.26% of identity |
| Eggnog | high mobility group(COG5648) |
| Kegg | Link to kegg annotations (AT2G17560) |
| CantataDB | Link to cantataDB annotations (CNT0002562) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445178.1) |
| Pfam | HMG-box domain (PF09011.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |