| Id Trinity | FTRINITY_DN59297_c4_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_16338 |
| Sequence | CAAGAATTTAGTAAATCAGGCGACTGCGAAGGCATCGTTGATTCAAATGTTGGTGATTGTGTTTAGGAGAATGGAAGCGGATTCTTCCACGGTTCCAATT CAACCGATTGTTGTGGCTGAATTGATGGAACCTATGGAAAAATCTGATGTGGATAAATCGATGCAGTTTGTACAGGGTTTTATCACAAAGAATATGCAAG ATAATGGAGTTCTGAACCCCGTCACGTCTAGTAGTAAAAATGGTCATGATGGTACATTTCAGAATGCTGTAGTGCAGACTATAAATCCGGCGGATTTGTT GGATTGTACTGATAAGGACATGTTGGATGCCAAGCATTGGGAGATCAGTATGTACAAGACGGCACTGGAGGGAAGGAAAGGGGAGCTGGTGGATGGAGAG GAGGTGGTGGAGAGGGATGATGATTCGCAGGTCCAGATTGTGAATAATCTGAGGAGGGATGCCTTTTTGGTGTTCAGGGCGCTTTGTAAATTGTCTATGA AGACGCTGCCTAAGGACGTGTCCTCCGATCTGCAGTCTTTGAAGGGGAAGATTTTGGCTTTGGAGTTGCTGAAGATTTTGCTGGAGAATGCTGGAGCTGT CTTCAGAACTAATGAAAGGTTTTTGGGTGCTATCAAGCAGTACTTATGTTTATCATTATTGAAGAACAGTGCTTCAACTCTTATGATTGTTTTTCAGCTA TCATGCTCCATCTTCATCAGTCTCGTATCAAGATTTAGAGCTGGATTGAAAGCAGAAATAGGAGTATTTTTCCCCATGATTGTGCTCAGGGTTCTGGAAA ATGTTGCTCAATCTGATTTTCAGCAAAAGATGACGGTGCTTCGTTTTCTAGAGAAGCTTTGTGTTGATTCACAGATATTGGTAGACATTTTTATCAACTA TGACTGTGATGTCAATTCACCAAACATATTTGAGAGGATGGTCAATGGACTTCTTAAAACTGCTCAAGGTGTCCCTCCTGGTGTAACAACCACACTTTTG CCACCTCAAGAAGCAATACTTAAACTTGAAGCCATGAAAAGCTTGGTTGCTGTTTTAAAATCAATGGGAGACTGGATGAACAAACAGTTGCGTATTCCAG ATCCTAATTCAGCCAAGAAAGCTGAACCAGCTGATAACAGTGCTGAAGCTGGAGGTTTACCCATGGTAAATGGGGACGTGGAAGAGCAAATTGAAGGATC AGACTCTCATTCTGAAATCACCAATGATGCCTCTGATGTTTCAAACATTGAGCAACGCCGGGCTTATAAACTGGAACTTCAGGAAGGTATATCACTTTTT AATAGGAAGCCTAAGAAAGGAATCGAGTTTCTCATCAATGCCAACAAAGTAGGCGATTCACCAGAGGATATAGCTGCTTTTCTTAAAGATGCATCTGGGT TGAATAAGACTCTGATTGGTGACTACCTGGGAGAAAGGGAAGAATTATCCTTGAAAGTAATGCATGCTTATGTGGATTCTTTTGACTTTCAAGGGATGGA GTTTGATGAGGCAATCAGGGCCTTCCTTCAAGGCTTTAGACTGCCTGGTGAGGCTCAGAAAATTGACCGAATCATGGAAAAGTTTGCCGAACGTTATTCC AAATGCAATCCGAAAGTCTTTTCTAGTGCTGATACAGCATATGTACTTGCATATTCTGTGATTTTGCTCAATACGGATGCTCACAATCCTATGGTGAAGA AAAAGATGTCCGCTGATGATTTCATTAAAAACAACCGGGGCATAGATGATGGAAAAGATTTACCAGAGGAGTTCTTGAGGTCCTTGTTTGAGAGAATATC TAGAAATGAGATCAAAATGAAAGAAAATGATATTCCTCCCCAACAAAGACAGTCTGTGAACCCTAATAGACTATTAGGCTTGGATAGTATATTGAATATC GTGATCCGAAAGCGTGGGGAAGATATGGAGACGAGTGATGACCTCATCCGCCATATGCAAGAGCAGTTCAAAGAAAAAGCTCGCAAAAGCGAATCAGTCT ATTATGCTGCAATGGATGTTGTAATCCTCAGATTCATGATTGAGGTTTGCTGGGCACCGATGTTAGCTGCTTTCAGTGTTCCTCTTGATCAAAGTGATGA TGAAGTTGTAATATCTCTCTGTCTTGAAGGCTTCCGCTATGCTATTCATGTCACTTCCGTAATGTCCATGAAGACTCACAGAGATGTTTTTGTGACTTCA TTGGCAAAGTTTACCTCACTGCATTCTCCTGCCGATATTAAGCAGAAAAACATAGATGCAATAAAGGCAATAGTTACTATTGCTGATGAGGATGGAAATT ACTTACAAGAAGCTTGGGAGCATATCTTGACTTGTGTCTCCCGGTTTGAGCATTTACATCTTCTTGGAGAGGGAGCTCCACCAGATGCCACATTCTTTGC CTTCCCTCAGAATGATTTGGAAAAAACAAAGCCAGCAAAATCAACAATTCTTCCTGTGTTGAAGAAGAAGGGACCTGGAAGGATGCAGTATGCGGCTGCC ACATTGATGCGTGGTTCTTATGATAGTGCTGGAATTGGTGGTAATGTTTCTGGAGCAGTGACATCGGAACAAGTGAACAATCTAGTTTCTAATTTGAATA TGTTGGAACAAGTTGGAAGCTCGGAAATGAATCGCATATTCACTCGGAGTCAGAAGTTAAACAGTGAGGCAATAATTGATTTTGTTAAGGCTCTATGTAA GGTCTCAATTGAGGAACTGAGATCTCCATCTGATCCGCGGGTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84793; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_16338
| Blastp | Brefeldin A-inhibited guanine nucleotide-exchange protein 3 from Arabidopsis with 78.63% of identity |
|---|---|
| Blastx | Brefeldin A-inhibited guanine nucleotide-exchange protein 3 from Arabidopsis with 78.2% of identity |
| Eggnog | and Sec7 domain(COG5307) |
| Kegg | Link to kegg annotations (AT1G01960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463522.1) |
| Pfam | Guanine nucleotide exchange factor in Golgi transport N-terminal (PF12783.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |