Id Trinity | FTRINITY_DN59303_c3_g3_i2 |
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Name Transcript | Ll_transcript_113445 |
Sequence | GCTGTCTTGACGGATACTTTTCATAAGCCTGGATTCAAATTACACGTCTTGGTGCTTCAGCATTTGTTCTGCCTGGCAGAAACTGGTGCCATAACACAGC CTCTCTGGGATGTTGCTACAAACCCTTATCCGTACCCAAATAATGCAGCATTTGTACACGAGTTCACTGTAAAACTTTTAAGCACTTCATTCCCCAACAT GACTGCTGCAGAGGTTACCCAATTTGTTAATGGACTCTTTCAGTCCACAAATGACCTTTCCGCATTTAAAACTCACATACGAGATTTTCTTGTACAGTCA AAAGAATTTTCAGCTCAGGATAACAAAGATCTTTATGCTGAAGAGGCTGCAGCTCAGAGAGAGCGAGAGCGACAAAGGATGCTTTCTATACCAGGGCTTA TTGCTCCGAGCGAGTTGCAAGACGATATGGTGGACTCGTAGATAGTAGGCTAAAGAGCATGGGAGTTCGTATCATTGGCATTTTGATTTGTGTCACTGGT GCTTATGTTCAATCAGATACTATATGCATTGATAACAGATGCCAGCATTTTCTCTAGTTTTTCTGATCTTCACCGAGATCTCATTTTGGGACTGATTTGG CATATGTTTCTGTTTTGGCTGGCTGGCAATACCACCAGCCTCGTTGTTTGGGTGAGTGTAGATTATTTAGTGGCTAATTTGGGATGATTCATCAGGGCAG CTTTTCATATAATCAAAGGATGGATGACTCAATTCCTAGAATTGATGACTTCTTAGGTGTGTGACCTCCTAACCTCTGGTGTTTTGTGCAGAAAAACCCT TTTCGTTTGATATTTTGTATTTTTTAACTTATTAATTTTAGGGTAATTGATATATCATGATTGCATTTATTTTCATGGTATTATTAGTGTGTTCCCCTTG ACCTATTGAAAAGTAAAACGTTTATTTTACTAGCTTATAGCAATCTCTGGCAACTATTCTATACTGTGGTGAAAGTTGTTAGATTCAACTTTCTATTTCG ACATCTTAGTGGTTGGGGACTTGAGGTGGTAAACTCTGTTAATTCTTAATATGAATAGTTCTGGAAAACTTAGTGGGAAGTATTATTTAATGACTTTATA CGTTAGTATTATTTTCACTATTAATTTAATTTATGCTTATTGACCTG BLAST |
Tissue | flowers |
Gene name | LI_gene_84859; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_113445
Blastp | Protein EXPORTIN 1A from Arabidopsis with 83.56% of identity |
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Blastx | Protein EXPORTIN 1A from Arabidopsis with 83.56% of identity |
Eggnog | exportin(COG5101) |
Kegg | Link to kegg annotations (AT5G17020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423472.1) |
Pfam | CRM1 C terminal (PF08767.10) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |