Ll_transcript_113787

• Id Trinity: FTRINITY_DN59306_c4_g1_i12
• Name Transcript: Ll_transcript_113787
• Sequence: TCGAAACCTCTCCCCCAATTTCAAATCAGGTTAGTTACCCTTTGAACACTCAAAATTGTTTCGATATCATAATAGGATCTTGTGATGGAATCCTATGTTT CGCTGTTAATATAAGTTGTGCCCTTTTATGGAACCCCGCTATTGGAGCATTCAAAAAGTTGCCACCTTTGAAAAAATACAACATATTTGGGTTTGGTTTT GATCAATGTAGTGATAGTTACAAAGTGGTTGCAATTTTACGCCGTAGGCATTCCAGTGATGGTCGAAACGCTTATACAACTAAAGTTAAGATTCATAATT TGGGTACTGATTCGTGGAGAAGGATTCAGGAATATCCTTTTGGTATTCCTAGTGGTTTATCGGCAAAATTTGTGAGTGGCACGCTTAATTGGTTGGCATC TACTCATAAGTTGAGTTCATATGCTATTGTTTCTCTTGATCTAGGGAAAGAATCATGTCAAGAACTATTGCAGCCTGATTATGGAGAAGTGAATGTGCTT AGTTTCAGTTTAGGGGTATTAAAGAACTGTTTGAGCATCATTGTTCTTCACGAAGAAGGTTTTACAGATGTTTGGCTTATGAATGATTATGGGAAGAAAG AGTCTTGGACTAAATTTCTTTCTTTTCCATGCTTGGGGGATCTTAATCTTTTTCCATATGCGAAGGTGATTTGCATTTATGAGGATGAAAACGTATTGTT TGAGTATGACTCTGTGTTAACCATTTACAATATCAGAAATAGAACTTTTAAGTTTCCTGAGATGCCAGACTTCGGTGGTAGGCCGTTTCCACAGATCTAT GTTGAGAGTTTGATATCACCTTGTTCTTAAACATTAGGATGTAGGAGTAGATGTTATGCTACGTTACTTGTAGAAATAAATGTGCCTTATATGTTTGATG CTTCCATTTATGTTGTGGATACAATGTTTGTTTTCATTACTGTTCAGTCCCTAGATCTTGTTAATCAATAATGAAGAGTATATTTTGGGTTTAATTATGT GTATGAGATTCATTGTTGCATTGATTTTTTTGTATTACTTATTAAGTAGTTTACAATCATGTATTGCATCAGAGGTTATCATTGTAGAATCTTAGTATCC TGACTTGTGTTTCTAACTTTTGAGTAACAAGTATCAAAATAGGATTATGCTTTCAAACAAGCCATAATCACTCATCACTTCAAATAACAGAAGCTACTAT ATGATAAGCATTACAACAAACAACCAATATTATTAGGACAAGCAAACATGCTACACATAATAACAAATTATCCTAAGTCCACAATTATTAATTAGGAAGT GGAGACATTGAAAATGATGTACTACATGTCCATCTTATGATAGAATGAACTTTTCTTCTCATTCTTGACTCATGTCTTTTCCTCAATAAACTTTTGAGTG GCTCACTGTTGAAATTGTAGAAGTTGAAGGCATTTGAGTGAAGAAACCTTGAGAGAAAGAGATGAAGATTGAATGTCTCTGCTGTATTGATTGAGGAGAA AAAGAAAGAGAAAAGTAAAGGGAGAGAGAGGAAAGAATTGAAAAGTATACATGTATCTTATTATGTTTAAAATGAATGAATACAAAGAATATAAATGCCC TTTATTTATAAGAGCAGAATCAGAAAACTAAGAAATGAATTTAGACAATAAAGTGAGCCAAATACATTGAAAACAGAAAACAGAAAGAAAAGATTAGTAG TTACAAAAACAGTTAACTAAACAGTTACTGAAAACAATTGCTGAAAACTAACTACTCTGATATTCCCCCTAAATCCGGAGCCACAGTGAGAACGTTGAGC AGAGGGCAGATCAGTAACACGAAGCTTGTCCCGAAGTAGAGTGAAACGAGAAGTGGAGAGAGGTTTGGTGACAGAAGTGACAAACTGTAACCCCCGAAGA AGACTTTGAATCCAGATTACCTCACTAGCAGCAACAGCCAGGCTACGATATTCAGCTTCTGTTGTGGACCGAGCAACCCAGTCTTGCTTCTTTGACCACC AAGAGACTAGATTAGTTCCAAGATAAACACACGCCCCAGAGGTGGACTTGCGATCATCAGGGTCCGAAGCCCAATCAGCATCACAGTAAGCAAAAAGAGG AAGAGAGAGATGAGGAGATGCGGGTCGTAAGAGCAAACCATGAGAGATAGTTTCTTGTAGGTACCGCAAAATCCGTTTGAGAGCTTTCCAATGTTCCTTT TGAGGTTGTGAAAGAAACTAACACACTTTACTGATACTATAAGAAATCTTTGGCCTGGTAATAGTGATGTATTGTAGAGCACCAGCAAGAGACCTATACA ATTTACCATCCTCTAAGAGATTGCTCCCATGTTTAGTAAGCTTGCATCCACCAATCACTGGAGTAGGCAAACTCTTCATATTATCCAGATGATACTTTTG TAACAGGTCCTTGACATACTTGGACTGAGTGAGAAGAAGAGAACCATTTGTGAGCTTCTGAATTTCGATCCCAAAAAAATAATCCAAAGCACCAAGATCT TTAAGGGTAAAAGCTAAATTCATCTTTTCAATAAGTTGCTTGATCAAAGTGGGAGAGGAACCTGTGACTATAATATCATCAACATAGCACAATACAAACA ACTTGTGTGTAGGAATAACCAAGAGAAAAAGAGAGTGATCACACCTACATTTACGAAAACCAAAAGACAGAAGAGTTCCTACTAACTTATCAAACCATGC CCTGGGAGCTTGCTTGAGACCATAAATTGCTTTGTGCAACTTGCAGACCAAAGTAGTATTAGACGATTTAAAACCTTCTGGTTGTTGCATGTACACTATC TCCTCAAGGATGCCATTCAGGAAAGCATTATTGACATCAATTTGTTGAACGTCCCATCCATAGGTTAGAGCCAAAGTTAGAACTATCCTTACAGAAGCAG GTCTCACAACAGGAGAAAAAGTCTCATTGTAATCACATCCCGGTTTTTGATGGAACCCTTTAGCTACTAACCGAGCTTTGTATTTGTTAATCGTACCGTC AGGATTCTCTTTGACTTTAAACACTCACTTACACCCAATAGCTTCTCTATCTGCAGGAAGTGTAACCAAACTCCAAGTATTATTCTTCATCAAAGCATCA AATTCAGTTTCCATGGCATTCCGCCATTCTGGAATAGTCAAGGCAATCTTTGCTGATTTAGGCTCAACATAGGCAGTAGAACACTAGGAGATGAAAGAGT CCTAGAACCAACTGTTTTTGACCGAGTAAGCATGGGATGAGTATCAACCGGTAACACTTGACTAGGACCAGGTTCCACCAAGGTGGGAGAGGCAGGCGGA GAAACCAAAGAACCAGGAGAAGATGGAGAGGAAAAAGTATGGGAAGCCGTGGGTGAGACAGAAGAATCAGATGTGTTACTCAAGGGACGGGATGGAGACA AAACAAAGAGAGGTATGCACAAATTATTACTAGAGTCGTTGTTGGGTGTAAAGTTAGGAGAAACCGAGAAAGGAAATTTGGCTTCATTAAACACAACATC ACGCGAGATATAGATTCTACCCTTAGAAGAAAGACACTTATATCCTTTGTGATGTGACGAATACCCTAAGAAAGTACACTCTTCCGACCTATAGTGTAAT TTGTGCTTAGTATAAGGCCATAAGCACGGAAAACATGAACACCCAAACACTTTTAGAAAGTTATAGTCGGGAGGAGATGTGTATAGACAAGTGTAAGGCA CTTTACCCTCAATAGACTGACTGGGAATCCTATTTATGAGATAAACAGCTGCGTCAAAAGCATATTCCCAATATGATAAAGGAAGAGAAGCTTGGGCAAG TAATGTGAGCCTCATTTCAACAATATGACGATGCTTCCTTTCGACCACCCCATTTTGATGATGAGTATGGGGACATATAACTCTATGATGAATACCAGAG ATGCTAAAAGAGAAGCAAAAGGGTGAAACTCCCCATCCCAATCTGTTTGGACAGATTTTAAAACAGCACTAAATTGAACCCTAACCATGGTGTGAAAATG TTTAAAAAGGTTAAGGGCCTCAGATTTCAGTTTTAAAGGGAAAAGCCAAGTGTATCTAATACATGAGTCAACAAACGATATATAGTACTTATAGCCCGAA ACTGGCATAACTGCTGCAGGTCTCCAAAGATCAATAAACACCAACTCAAAGGGATGAGAATAAACTGTATGTGATGAATGTGAAGGTAAACAATGTGACT TTCCCAAAGCACAAGCAGTACAAAAATCAGTTACTGTTTTATTAATGAGAGGAAGTTTACAATGTTTCAATATATTTTTTACAACCTCTTTATGTGGGTG ACCTAAACGACAATGCCATAACGAAAACATATGTGTATTGCTAGGATCTGTACGAACAGTAGAAACAGAAAAATTACAACACGAAGTTACATCAAGACTA CCAGTACTTGAGGCAGAAAACCGTGAGGCTGGAAGAGGTAGACTAGTGAAGACATACAACCCATCAGGACCGAGAGTGCCTTCTAGAAGTAAGGTACCAT CAACCTGAGATTTTACACAACAATAGTGAGAGTGAAATTCAAAATAAACATAGTTGTTCTTGGTGATAAAAGGAACCAAAAGTAAATTGTTAAGGGTGAG AATGTGTGCGGGATCATTAGGAGAATAAAATGCAGATGTACCAATACTTGTAATAGGAGCACCTGTACCATTACCCATAACAATGTTATCAGAACCCGGA AGGCTGGTAGAATGCATCATATTTGTTGGATCAGCCGTAACATGATGTGTGGCTCCTGAATCGGGATACCATTACCGAGAATTATAAGCATGTGGTCCTT GTCGAGGCTGTTGTCCATGTGTAGGATTAAAGGAATCACAGTAGGAATGTGCAGGGGACTAGGAGCAATCCCTAGAATAGAGGGTTGATGATATCCAAGA TGAGACATTGGAACAACACTATATGGAACAGTTCTGGGTGCTGTAAAGTGTTGCTGAAACGAGTTGGGAGGACGAAAAACAGTCCCTGGGAGTGATGCAC ATCTGATCGAAGCAAACTGAGGAGAAGAAGAAACCTGTGACTGCATAACTAAATCAAAACGATACCAGCACTGTAAAGCTTCATGACCAGTTTTGGAGCA AAGTTGGCACCGAACAGAACTCTGACCACGTCCAAACCGATTGCTTATGCCATGACTATAATAATTGCCATGTCCGCGAGTAGAAGGAGGTGCGCCGGTT GGAAAGAACTCTGCTGGATGCTGCAACTGTTGTGCGGGAAATCCAGATTCAGCGACATATTCAGAACGCTGAAGCTGTCCAGCAGTGGATAATTGGTTCT TGGAGGTGGAGTGAGCCACATTAACGGAAAAAACCTCAGTAGAAGGCGGATGAATGCGTTCCAGATACGTCTCATGTGCCATTAACAGAGATTCAAGTTG AATAAAAGAGCAAAACTCAGGACGGTTATTAATCGTGGTAACAAAGGACTCGTATTCAGACGGGAGTCCTTCAAGAACCAAACGAACCTGCTCTCGGCCA GAAACGACCTCACCAACGGCAGCAAGAGAGTGAACCAATGCTTTTATACGAGTAACGAACTCAGTTACAGACTGAGTGCCCTTCTTGATGGTGCGAAGCT CAGACAAAAGAAGCTGACTCCTAGCACGAATCAGGGAATCGAAAAAAGTGTGAATTTCGTCCCAAATCTGCCAAGCGTGACGGAGCCCTAGAACACGCAA TTGAATCGATTCAGAGAAAGATTGCAGCAACCAGGAGACCAAATGCTGATCTTGTTCCTCCCATTGAAGAAAAGTAGGATTCAACCGATCACACTCACGG TCCTCCTCAGAAAGAAACCGAAGGGGAACCTGTGGATTAACAACAAACCTTTCCAGCCGATGTGAAGCAAGAACAGCTTCGACTTGTTGCTTCCAAATGA AATAATTCTTCTCGGAAAGCTTGACGGAGATACTATGAGAGAATGTGATGGTTGAAGGCGGAACCACCGACGTAGTGTTAGAAATTTATAATTTCTAATT AAGGTGGGCATCATATGTTTAATACAATTGTATCCGCTATTTATTTTCGGGGTTATTAAACAGTGATCTAATTTCTGACAACCCATATGACTTCTAAAAG TGACACTGAATATGGGCG
• Tissue: flowers
• Gene name: LI_gene_84875;
• Additional information: details;

Expression of Ll_transcript_113787

FPKM

• FPAB: 0.7
• FPNAB: 0.9
• LF1: 1.3
• LF2: 0.7
• LF3: 0.6
• LF4: 0.4
• UF1: 0.5
• UF2: 0.7
• UF3: 0.5
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_113787

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 28.03% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 40% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464137.1)
• Pfam: GAG-pre-integrase domain (PF13976.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;