| Id Trinity | FTRINITY_DN59306_c4_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_113793 |
| Sequence | TCGAAACCTCTCCCCCAATTTCAAATCAGGTTAGTTACCCTTTGAACACTCAAAATTGTTTCGATATCATAATAGGATCTTGTGATGGAATCCTATGTTT CGCTGTTAATATAAGTTGTGCCCTTTTATGGAACCCCGCTATTGGAGCATTCAAAAAGTTGCCACCTTTGAAAAAATACAACATATTTGGGTTTGGTTTT GATCAATGTAGTGATAGTTACAAAGTGGTTGCAATTTTACGCCGTAGGCATTCCAGTGATGGTCGAAACGCTTATACAACTAAAGTTAAGATTCATAATT TGGGTACTGATTCGTGGAGAAGGATTCAGGAATATCCTTTTGGTATTCCTAGTGGTTTATCGGCAAAATTTGTGAGTGGCACGCTTAATTGGTTGTCATC TGCTCCTAATTTGAGTTCATATTCTATTGTTTCTCTTGATCTAGGGAAAGAATCATGCCAAGAACTATTGCAGCCTGATCATGGAGAAGTAAATGTGCTT AGTTTTAGTTTAGGGGTATTAAAGAACTGTTTGAGCATCATTATTCATTATGAAGAAGGTTTTTCGGATGTTTGGCTTATGAATGATTATGGAAAGAAAG AGTCTTGGACTAAATTTTTGTGTCTTCCTTTCTTGGGTTTTCCTCATGTTTTGCCATATGGGAAGGTGATTTACATTTATGACGATAAAGAAGTATTACT TGAATTCAACTCTGAGTTAGCCATTTACAATTTCAGAAATGAAACTTTTAATTTTCCTGAGGTTCCAGACTTCTATGGTTGGCCGGAACCACAGATCTAT GTTGAGAGTTTGATATCACCTTGTTCTTAAACATTAGGATGTAGGAGTAGATATTATGCTATGTTACTTGTAGAAATAAATGTGCCTTATATGTTTGATG CTTCCATTTATGTTGTGGATACAATGTTTGTTTTCATTACTGTTCAGACCCAAGATCTTGTTAATCAATAATGAAGAGTATATTTTGGGTTTAATTATGT GTATGAGATTCATTGTTGCATTGATTTTTTTGTATTACTTATTAAGTAGTTTACAATCATGTATTGCATCAGAGGTTATCATTGTAGAATCTTAGTATCC TGACTTGTGTTTCTAACTTTTGAGTAACAAGTATCAAAATAGGATTATGCTTTCAAACAAGCCATAATCACTCATCACTTCAAATAACAGAAGCTACTAT ATGATAAGCATTACAACAAACAACCAATATTATTAGGACAAGCAAACATGCTACACATAATAACAAATTATCCTAAGTCCACAATTATTAATTAGGAAGT GGAGACATTGAAAATGATGTACTACATGTCCATCTTATGATAGAATGAACTTTTCTTCTCATTCTTGACTCATGTCTTTTCCTCAATAAACTTTTGAGTG GCTCACTGTTGAAATTGTAGAAGTTGAAGGCATTTGAGTGAAGAAACCTTGAGAGAAAGAGATGAAGATTGAATGTCTCTGCTGTATTGATTGAGGAGAA AAAGAAAGAGAAAAGTAAAGGGAGAGAGAGGAAAGAATTGAAAAGTATACATGTATCTTATTATGTTTAAAATGAATGAATACAAAGAATATAAATGCCC TTTATTTATAAGAGCAGAATCAGAAAACTAAGAAATGAATTTAGACAATAAAGTGAGCCAAATACATTGAAAACAGAAAACAGAAAGAAAAGATTAGTAG TTACAAAAACAGTTAACTAAACAGTTACTGAAAACAATTGCTGAAAACTAACTACTCTGATATTCCCCCTAAATCCGGAGCCACAGTGAGAACGTTGAGC AGAGGGCAGATCAGTAACACGAAGCTTGTCCCGAAGTAGAGTGAAACGAGAAGTGGAGAGAGGTTTGGTGACAGAAGTGACAAACTGTAACCCCCGAAGA AGACTTTGAATCCAGATTACCTCACTAGCAGCAACAGCCAGGCTACGATATTCAGCTTCTGTTGTGGACCGAGCAACCCAGTCTTGCTTCTTTGACCACC AAGAGACTAGATTAGTTCCAAGATAAACACACGCCCCAGAGGTGGACTTGCGATCATCAGGGTCCGAAGCCCAATCAGCATCACAGTAAGCAAAAAGAGG AAGAGAGAGATGAGGAGATGCGGGTCGTAAGAGCAAACCATGAGAGATAGTTTCTTGTAGGTACCGCAAAATCCGTTTGAGAGCTTTCCAATGTTCCTTT TGAGGTTGTGAAAGAAACTAACACACTTTACTGATACTATAAGAAATCTTTGGCCTGGTAATAGTGATGTATTGTAGAGCACCAGCAAGAGACCTATACA ATTTACCATCCTCTAAGAGATTGCTCCCATGTTTAGTAAGCTTGCATCCACCAATCACTGGAGTAGGCAAACTCTTCATATTATCCAGATGATACTTTTG TAACAAGTCTTTGACATACTTGGACTGAGTGAGAAGAAGAGAACCATTCGCGAGCTTCTGAATTTCGATTCCCAAAAAATAATCCAAAGCACCAAGATCT TTAAGGGCAAAAGCTAAATTCATCTTTTCAATAAGTTGCTTGATCAAAGTGGGAGAGGAACTCGTGACTATAATATCATCAACATAGCATAATACAAACA ACTTGTGTGTAAGAGTAACCAAGAGAAAAAGAGAGTGATCACACCTACATTTACGAAAACCAAAGGATAGAAGAGTCCCTGCTAACTTATCAAACCATGC CTTGGGAGCTTGCTTGAGACCATAAATTGCTTTGTGCAACTTGCAGACCAAAGTAGTATTAGACGATTTAAAACCTTCTGGTTGTTGCATGTACACTATC TCCTCAAGGATGCCATTCAGGAAAGCATTATTGACATCAATTTGTTGAACGTCCCATCCATAGGTTAGAGCCAAAGTTAGAACTATCCGCACAGAAGCAG G BLAST |
| Tissue | flowers |
| Gene name | LI_gene_84875; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_113793
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 35.47% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 37.86% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439762.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |