| Id Trinity | FTRINITY_DN59322_c1_g1_i27 |
|---|---|
| Name Transcript | Ll_transcript_115172 |
| Sequence | CAAGGTTGCATGCCAAATGATTCTAGATAAAATGGGTATGAAAGGCTATCAGATAGGGAAGACAAAGGTTTTCCTAAGAGCTGGCCAAATGGCTGAGCTG GATGCAAAAAGAGCAAAAGTTCTTGGAAATGCAGCTAGAATCATCCAGGGGCAAATACGTACCCATATTGCACGCAGAGAGTTCATTGAATTGCGTCAAG CTGCAATTCTTGTGCAGTCTAATTTGCGAGGATTATTGTCCCGAAAGCTCTATGAGCAGTTGCGGCGTGAGGCAGCAGCTGTGAAGATAGAAAAGAACTT CAAAGGATACATCGTCAGGAAGTCTTACACAACAGAGCGACTGTCTGCAATTATATTGCAGACAGGTTTAAGGGCCATGAAGGCTCGTGACGAATTTAGA TTTAGAAAGCAAACAAAGGCTGCAATTTATATCCAGGCTCGTTTGCGTCGGCTATTTGCATATTCATATTTTAAAAGATTGCAAAAAGCTGCAATTGTTA CTCAGTGTTGCTGGAGGAGAAGGGTTGCTAAGAGGGAACTCAGAAATCTTAAGATGGCTGCAAGAGAAACGGGGGCCCTTAAAGAAGCAAAAGACAAACT AGAAAAGCGTGTTGAAGAACTTACGTGGCGTTTGCAAATTGAGAAGCGTTTGAGAACTGATTTGGAAGAGGATAAGGCACAAGAAATTTCAAAGTTACGG GATACTTTGCATGCAATGCAAAAACAAGTAGAAGAAGCAAATGGCAGGGTTATCAAAGAGCGAGAGGCTGCACAAAAGGCCATTGAAGAAGCACCTCCAG TTATTAAGGAGACTCCTGTTATAATTCAAGATACTAAAAAGATTAATGCTTTAATGGATGAAGTCAATAGTTTGAAGGAAGGACGGGAAAAGAAAGGATT AGTTGTTGCGAGGTGCTAATCATTTATTTGCAATCAAGAAGTGAGTTTATTAAGTCCCTTGTTTACAGGAATCATTGCTATTGGAAAGAGATGCTAAAGA AGAGGCCAGGAAAGATCACGCCAAGGCTGAATCTAGAAATACGGAGCTGCTTAAAAAAGTTGAAGATTCTGATCGCAAAGTGGAACAACTCCAGGAATTG GTTCAGAGATTGGAGGACAAAATTTCCAATTCAGAGTCAGAAAATCAAGTTCTTCGCCAGCAAACACTGGCGGTATCACCAACTGGAAAATCTCTCTCTG TAAGACCAAGGACAGTCACTTATCAGAGGATACCAGGGAATGAGAATGCTCAAGATGGTGAAGCGACAACTGGACCAGTAACAGATATGACTCTTGCTGT CTCAAATGTACGTGAGCCTGAATCTGAGGGGAAACCACAAAAATCTCTCAATGAGAAGCAGCAAGAAAAACAGGACTTGTTGATCAAGTGCATAGCACAA GATTTGGGATTTTCTGGAGGCAAACCTGTTGCTGCGTGTGTCATATATAAGTGCCTTCTTCACTGGAGGTCATTTGAAGTTGAAAGAACAAGTGTCTTTG ATCGAATTATTCAAACAATTGCTTCAGCTGTTGAGGCCCAGGATAATACTGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTGTTGTTGCTACT CCAACGTACTCTCAAAGCAACTGGAGCTGCTAGCTTAACACCGCAAAGGCGGAGAACAACATCATCTTCACTTTTTGGAAGAATGTCTCAAGGGATAAGA GCATCTCCCCAAAGTGCTGGGAAATCATTTCTAAATGGTCGAGGTCTTGGTAGATTGGATGGTTTACAGCAAGTGGAAGCAAAATATCCGGCACTGCTGT TTAAGCAACAGCTTACTGCCTTTGTTGAAAAAATATATGGAATGATAAGAGACAACCTAAAAAAGGAGATATCTCCATTACTTGGACTGTGTATACAGGC TCCTAGGACCTCACGTCAAAGCTTAGTAAAAGGGCGGTCACATGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAAAATG TTAAGCAATTATCTAAAGATAATGAAAGCAAATTATGCGCCTCCTTTCTTGATACGTAAAGTGTTCACTCAAATATTCTCATTCATCAATGTTCAATTAT TCAACAGTCTTCTGCTGCGTCGTGAATGTTGTTCATTCAGCAATGGGGAGTACGTAAAGACAGGCTTAGCTGAATTAGAACAGTGGTATGTTGTTGAGGC AACGGAGCAGTATACTGGCTCCGCTTCAGAGGAACTGAAACATATCAGGCAGGCTGTTGGATTCTTAGTGATACAACAAAAACCCAAAAAATCCCTGAAT GAAATAACAAAGGAGCTATGTCCTGTTCTCAGTATACAACAGTTATACAGGATTAGTACAATGTACTGGGATGATAAATATGGCACACACAGTGTATCTA CAGATGTTATATCAAGCATGAGAACTATGATGTCTGAGGACTCTAATAATGCTGCCAGCACTTCTTTCCTATTGGATGATGACTCAAGCATTCCATTTTC GGTGGATGATATTTCCAAATCCATGCAAGAAGTAGAAATAGCTGAGGTGGATCCTCCTGCGTTGATGCGCGAGAACTTAGGATTTGGGTTCTTACTAGCA CGCTCAGAGTGATGCTAATTATCAATAATTATTGCCTCTGATGCTCCTTTTTACCGCACAAAGTTTCAAGTGCCGAAAACTGTGCATATAATTTCACTGT GGTCAAGTGTATATATTTTCACCAACTCAGGCTTCTGATATTGGTTTGTGGCCTGGGTTAATTCATTTATACCCCTCAAGTTTCATCAACCTAGGGGTTT TGCTAAGAAACCATGTCACACAAATTAATGTGATAAATGGCCATCATATGTAGAGAGGTTGTTGTCCAGACACTGCTGGCACACATGCCCAGTGTTATTT TCTCATGTTGATGGTTTTCAAGTGTTATACAGGTGAGTGTAATTAGTGACTTGAGATGTTTGTTGTAGGGCATCTTAGTCTTGTGTGGTTATAATTTGTA TTTAATTAATTGGTATCATATTATTATTTTTATTTAAATTTAAATACTAGGTATTTTTTGTGTCTGCAATGACTGAGTTATATGAAAGATGACTCGGTGC ACCTGTACAGACGTGAGATTGTTGATTTGAGTTTTCATTTCATTATTTTGTTTTAATATATCATTCTTTTCTATGATATGAGACAAACATTATATCTAAT TTTGTTTCTTGATATGTATATTTAAGAAAAAGCTCATTTAAAGTGATTTATATTGTGTAAAAGTTGTTGTCCTTTAGGTTTACCATTTGGAAATTGACTT TTGCTGTTTGGACTTTTGTTTTTGTATCTGTCTATGTTAATATTTGACGCATGGAAAGTTGTCTCATTGGCCATGATATGAATTATGAAGTTTTTCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_85043; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115172
| Blastp | Myosin-17 from Arabidopsis with 82.54% of identity |
|---|---|
| Blastx | Myosin-17 from Arabidopsis with 75.91% of identity |
| Eggnog | myosin heavy chain(COG5022) |
| Kegg | Link to kegg annotations (AT5G20490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443077.1) |
| Pfam | DIL domain (PF01843.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |