| Id Trinity | FTRINITY_DN59340_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_115329 |
| Sequence | AACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATAATAAATTCAACCTCCCATCTATAATTCTATATAAACTCAACCTCCC ATCTATTCTTCACAAACATCCTCTCCAAGCTCCAACATTGTTTTCTCCCTTGTATTTTTTCAACCATGGCTACAATAACAATACTCACTTTACTCTTCTT TTTCTTCACTTTATCACTAGCTTTAGACATGTCCATCATTACCTACCCCCACAACCATAACCAACCCAACCCACGAAGCAACGATGAGGTTAGGACCATG TACGAGGAGTGGTTAGTTAAGCACCAAAAAGTGTATAATGGGTTGGGAGAGAAAGACAAGAGGTTTCAAGTTTTTAAGGATAACTTGGTGTTCATTGATG AGCATAATGCTCAAAACAACACATACAAACTTGGGTTGAACAAGTTTGCTGATTTAACTAATGAGGAATACCGTGCCATGTATTTGGGTACGAGGAATGA TCATAAGAGAAGGGTTATGAATGCTAAGAAAAGTGGTCACCGTTATGCATATGAAGCACGTGATAGGTTACCAGTGCATGTTGATTGGAGGTTGAAAGGT GCTGTTGCTCCAATCAAAGATCAGGGAGGTTGTGGAAGTTGTTGGGCATTCTCAACAGTAGGTGCAGTTGAAGGCATTAATAAAATAGTGACAGGGAAAT TGGTCTCTCTATCAGAACAAGAACTTATTGATTGTGACAGAATCTATGATGAAGGATGCAATGGTGGTCTCATGGACTATGCCTTTGAGTTCATCATTAG TAATGGTGGCCTAGACACAGAGCAAGACTATCCATACAAGGCCACTGATAGCATTTGTGATCCAACTAGGAAGAATTCTAAGGTTGCAACCATTGATGGG TATGAAGATGTTCCAGCATATAATGAAAAAGCTTTGAAGAAAGCAGTGGCTCATCAACCTGTGAGTGTTGCTATTGAAGCCTCTGGCAGGGCCTTCCAAC ACTATAACTCGGTAAGCAATATGCAATGAGTTCTATATTTTAGTGACTCAATTGAATCAATGACTACTAGTCTCTTAGGTCATGAGTTCGAATTGTGGAA TTCTCCCTCTTGGGAGAATAAAAGAATGCAGGGGTATTTAAGCCTAATTAATAGATGGCACGCTCAATAAATTTATGGTCTCGAGAGGTCGCATGTACTT AGCGATACGAAAACCACACATTTTATATAGAATAGTGCCAATAAGCTTGTGTTATTTGTTTCAGGGTGTGTTTACTGGTAAATGTGGAACAGACTTGGAC CATGGTGTGGTTGCAGTTGGCTATGGAACTGAAAATGGTGTCGACTATTGGCTCGTAAGAAACTCGTGGGGCGGTTCGTGGGGCGAGGAGGGCTACATCA AGATACAGCGCAACGTGAGAGGTACATCAGCTGGGAAATGTGGAATCACAATGCAGGCCTCATACCCAGTGAAGTATGGCAAGAAATCAATCCTCAATTC AGCTAATGAAAGCACTGGAATGTATATTAGCAGTACTTGAAAACCTTCATCAATGGGAATGAATTTGAACTAGTGCTAGAGTTGTATGAAATTGTTGTTT GAATTTCTGTTAACTAAGGTATTATTCCTGTTGGGATGCAAATGTACATAGATTTCTTCATATGAAAACTGCATCTAGTAATCAATTTGTACCAATTTGA ATGTTAAATCTTAAATCAATTATTTCCATGTGTTAGTTATACTTCTGCAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_85220; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115329
| Blastp | Probable cysteine protease RD21B from Arabidopsis with 63.16% of identity |
|---|---|
| Blastx | Cysteine proteinase RD21A from Arabidopsis with 62.96% of identity |
| Eggnog | cathepsin(COG4870) |
| Kegg | Link to kegg annotations (AT5G43060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446808.1) |
| Pfam | Cathepsin propeptide inhibitor domain (I29) (PF08246.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |