Id Trinity | FTRINITY_DN59353_c4_g3_i9 |
---|---|
Name Transcript | Ll_transcript_115484 |
Sequence | CGAAATATCTTTTTTTGTTCTCTCTGTCTTAATTTTCTCTTCTTCTCTTATTTTTTCTCCCATTGTTCTAACATTTTCCCTTGAATCTACCGAAATCCAA CCCCACCCAGAAAGTCAATGGCAATCGTATATTCATAGTTTCACACACTCTCATCTTTTTTCCCCTGTCACACCTTTCTTGTCCTCAAAGTTCTTCATTC TATATATACTCACACTCATCACTTAATCTTAATAATTTTATTACCAAAATATCTTATTTTTTCTTTTCATTTTCACTCCCAAAAAAATGCATCTCTACAA TGCATGGCTTCCACCACCCGTCGCCGCCCAAACCGCCGCCGAGAGAGACTCCTTCCACCGCCTCGTCTCAATCCTTAACTCCTCCTTCCGCTCCGATGAT CCCGATTCCGTTTATTCCACTCTCAAATATATCTCTGTTCTTGACCTTTTCATAAAGGCGAAAAGTGATGTATCTTTGGAAGATGTTCAATCCCTTATTC AGACGGGTCTTGAATTGTTTCACTTGTCTCATAATAAGCTTTATGTCCAGGTTAGATGGGGAAATTTGGTAGTCAGACTTCTCAACAGGTATAGGAAAAA GGTTGCATTGAGTATTCAGTGGAGGCCTTTATACGATACTCTAACTAGCACACATTTTACTAGAAGTACAGGTCCAGAAGGTTGGAGAATAAGACAACGG CATTTTGAAACTATAACTTCCCTTGTTCAATCCTGCCGGAAGTTCTTCCCATCAGGTTCTGCCTTTGAGATATGGTCTGAGTTTAAATCTTTATTGCGAA ACCCATGGCATAATTCCACCTTTGAAGGTTCTGGATTTGCAAGACTGTTTCTCCCAACAAATCTGGACAATCAGGCTTTTTTTACACATGATTGGATAAA AGAGTGTATGGACTTGTGGCAATCTATACCGAATTGCCAATTCTGGAACAGTCAATGGGCAGATATTATAGCCCGGGTTGTAAAAAATTACCACAATGTT GACTGGGAGGACTTTTTGCCTTCCCTTTTTGCTAGATACTTGAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTATTCACTGGATG TCCCGAGATACACAAGGTTCTTGTTCTCTAATAAAACTGCCACCCCATCAAAGGCTACTGCTAAATCAATTGTGTATTTACTAAAACCTGGTAGTTCAGC ACAACAGCACTTTGAGAAGTTGGTCAACATTTTGGAACAATACTATCACCCCTCAAATGGTGGTCGCTGGACTTACTCATTGGAGCGGTTTTTGTTCCAT GTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGAGCATAAATAATAGCAGACCTGCTGAACAGCATCTTGGGGAATCAGAGAGGGTTTTCT TTGTTACTTCGGTGCTGAAGTTAATTGATCGTGGTCAATACAGCAAGAATGAGCATCTCTCCGAGACAGTTGCTGCAGCAACTTCCATATTGTCCTATGT GGAACCCTCATTGGTTCTGCCATTTGTGGCATCTCGGTTTCGTATGGCCCTTGAGACGATGACTGCCATCCACCAGTTGAAAGTTGCAGTTATGTCAGTG GCATTTGTTGGGCGTTCATTATTTTTTACATCTTTATCCGCTTCTTCCATGAAATCACTTGATCTTGGTGGTGGTGATGAGGCATTCATTGATCTTGTGG GGCTTTCATTATCCAATGCATTACTTGGCATGGATGCTAATGACCCTCCAAAAACCATGGCTACCATGCAATTGATTGGTTCCATTTTTTCAAATATGGC TTTATTGGATGATAACATTGATGACTTATCATTTATGCCAATGATCCGCTTTTCTGAATGGTTGGATGAGTTCTTATGCCGTCTGTTTTCCTTACTTCTA CACTTGGAACCCAGCAGTGTTGTAAATGAAGGTCTGCAGTCGTCAGCTGCTTCAGGAACTTTTCTGGTTAATGAGGGTCCATACTACTTTTGTGTGCTTG AGATTCTTCTTGGGAGGCTGTCAACATCACTGTATAACCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGGACAAATATTCTTCCGGGTGCTATTGCAGA GGTTGGACTGCTCTGTTGTGCATGCCTTCACTCACACCCAGAAGCAGCAGTTAGTCAAATTGTCGAACCAATATTAGTTTCCGTGATATCCTCTTTGAAA GGAATACCACGGACTGGGTTTGGAGGGGGAGGAACTTTCGAGGCTTGTGCTTCAACAAAGGTTAAATCAACGATTTCACCAGCTCTTGAAGCGGCAATTG ACTATCAACTAAAGATATTATCAGTTGGAATCACATATGGAGGCCCAGCACTCCTACGCTACAAGGATCAATTCAAAGAAGCTATCTTCTTGGCTTTTGA CTCACCATCTTGGAAGGTTAATGGGGCAGCTGATCATCTTCATCGATCCCTCCTTGGAAGTCAGATTCATTATTATCCAATAGATCAGTATAAGTGTGTT CTTAATCACCCTGATGCAGCTGCTCTAGAGGAATGGATTAGCACAAAAGACTTTTCCACTGATGATAGATTGATCCCAAAGTGGCATATTCCTTCTGATG AAGAAGTTCAGTTTGTTAACGAGCTTTTAGACATTCACTTTAATTCAGCTTTGGATGATCTGTTGAAAATATGTCAGTCTAAAATCCATGTTGACCAAGG AGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGTATTGAATCAACTTTGCAAGGACTTTTTTCTTGCTTGCCTGATTTTGTTCCCAGCTCTAGGGAT GGAATGGTTGACGATTCAAACCATATGTTTCTAATTGCTGGAGCAACAGGTTGTACTGTTGGTAGTACTGCTCTGCGAGAAAAAGCTACTGAGATTGTAC ATGCAGCCTGCAAATATGTCCTTGAGAAAAAATCAGATGACAGCATCCTGTTGATACTCATTATCCGTATTATGGATGCTTTAGGAAACTATGGAAGTTT GGAATATGATGAGTGGTCTAGTCACAGGCATGCTTGGAAGTTAGAGTCTGCTGCAATAATAGAACCTCCGATTAATTTCATTGTGTCTTCTCATTCCAAA GGAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAAGCATTCATGCACAATACCTGGAGGTCTTCACAGGCAACTTATCATCTTTACCGTTTGAGTGGAA ATTTCTTTCCATCAGATCATGCGACTCTTTTGATGGATGATTTGTTGAGTCTCTGTTTGCACAGTTATGAAACTGTTCGCCTACTTGCAGGAAAAGCTCT AGTAAAGCTGATCAAGAAGTGGCCATCTATGATTTCAAAGTGTGTTATCACTCTTACCAATAACTTGCAGGACCCCAATGAAAAGGAATATGCTGTGCTG GGTTCTTGTTCAGTGCTTGCCTCACAAACAGTACTCAAGCATTTGACAAAGGATCCAAAATCATTCTCTTCATTTATCGTGGCAATTCTTTCAAGTTCTC ATCATGAATCCTTGAAAGCTCAGAAAGCAATTAATGAGCTTTTTGTAAAGTACAACATCCAATTTTCTGGAGTATCTAGAAGCTTTTTCCAGATATCAGA CAAAGACAACCATACCGGTGGACTTTCCTTTTCAGATTTGGTTTCCCAGATTGGCTCTATGAGTTTTGATTCTAGTGGCTTGCATTGGCGGTATAATTTA ATGGCTAACAGAGTTCTGCTCTTGCTGGCTTTGGCTTCTCGGAACCACCCAAATTCATCATTGAAAATTCTGAGTGAAACTGCTGGACACTTTTTGAAAA ATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCAATTTCAGCTCTGAATACACTATTAAAGGAATCACCTTATAAGCTGTCTCCTGGTGAGAAATC TGTTGTACTTGAGGATTTACAAGGCAATGCCAAGTCATCCCTTGAAGGAGCTTTAACTAAAGCTTTTCTGGAAGAGGGTTTTTTCAACGAGACACTGACT AGTCTTTCTCATGTTCATATTATAACTGACACTGAAACTGCTACTAGAGGACATCAAGGAGATTCCAGTATCCAAAGCTTAGCAGACAAATCTATAACCC ACTTCTATTTTGAATTTTCGGCTTCATGGCCACGTACACCAAGTTGGATTTCCTTTTTAGGAAATGATACATTCTACTCAAGTTTTGCACGTATTTTCAA GCGGCTAGTACAAGAATGTGGCATGCCTTTAGTATTGTCTCTTAAAGATGCAGTGGATGAGTTTATGATTGCTAAGGAGAGGTCTAAACAATGTGTAGCT GCTGAAGCATTTGCAGGTGTGTTACATTCTGATATTGATGGTCTCTCAGGAGCATGGGAAAGCTGGCTGATGCCCCAATTGAAGAATATCATTTTAGCAC AATCTGTTGAATCAGTTTCTGAGTGGGCCAATTGCATTCGATATGCAGTCACCGGTAAAGGAAAGCATGGAACAAGAGTACCTCTTTTAAGGCAGAAAAT TCTGGATTCTTTGATGACACCTTTACCTCCAACAGTAGCTACCACTATAACAGCGAAACGATATGCTTTTCTGGCAGCTGCACTCATAGAAATATCCCCA CAAAAAATGCCAGCAGCTGAAACGCAGATCCACAATACCCTTCTGAAGGAAGTTCTTGGTAGTATGTGTCACTCATCAGCCCAAGTACGGGAAGCTCTTG GTGTTACCCTTTCTGTGTTGTGCTCTAACATTCGGCTATATCATTCAAGTCGTGATCATAATGATGATGAGAGAAACAACAATGTTGATGATTTAATGAA AGATGAAAGCTGGGTTCAGTTCCTTACAGAGCGAGCAGCTGAAGCTGTTGTGAACATTCAGATTGCTACCCAATCAGACAAATTGGTGAATTCCATAGAT ACAAGTTCTCAAAATGGGCATTCTGATGGTGATTCACAAGATGACATGAAATGGATGGAAACGGTACTCTACTTCATAATCTCATCATTGAAGTCTGGGA GATCCTCATACCTAGTCGACGTGATTGTGGAGCTTCTCTATCCTGTGATTTCCTTGCAGGAAACATCAAATAAAGATTTGTCAACATTAGCCAAGGCAGC ATTTGAGTTGCTCAAATGGATGATTGTCTGGGAACCTCACCTTGAGAAGGTTGTTTCCGTGGTTCTTTCTGCTTCTGAAGATTCCAACTGGCGAACTAGA TCTGCTATATTGACATATTTGCGTACTTTTATGTATAGGCACACTTTCCTTCTTTCAAGTTCAAAGAAACAGGAAATTTGGAGAGCCGTTGAGAAGTTAC TAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCAGCAGTTTTAGCAGGGTTAATGAAGGGTGGAGATGAAAATCTAGCTAAAGATTTCCGTGATAG AGCTTATGTGGAGGCAAATATTGTACAAAGGAGAAGAAAGTCGAGAAATTCAGGTTCTGGTTCATCTGTAGCATCTCTTCATGGTGCTGTATTAGCTTTG GCAGCTTCTGTATTATCAGCTCCATATGATATGCCAAGTTGGTTGCCTGAACACGTTACACTACTAGCTCGTTTTAGTGGGGAGACATCCCCTGTGAAAT CTACAGTTACAAAAGCAGTTGCAGAGTTCCGGCGGACCCATGCTGATACATGGAATGTTCAAAAAGAGTTATTTTCTGAAGAACAACTTGAGATTTTGGC CGATACATCCTCTTCATCATCGTATTTTGCTTGATTTAATATTTCAAAGATAGTGTTGGGAGAGTTCTAAAAATAATGGCTGGGAAGAGCTTTTCATTGT AGTGTGTCTATAAATTGTAAAAGTAGCTCTTGTTTACATTTAGTACAATTAATCATATTCATGAGTACTTTATTCTTCATTCCAGTATTCAAAAGTTGAG CATCTTGCCTTCCTCTGTTCTGTAATCTTTCTCATACCATAGGGTTATTTAAATCATCTGCTGGTAAATCCCATAAGACACAATCTGGGTTGAATATATT GGATATATTTCTCATTTCTTTTGTAGCCTCCGAATCATCCCCATTTTCTTCAAGTTTTTCATATAACTGGCTTTGATGATCCATGGGTGTGAATGTGCTT CCAGTACATACACTTTGGCTCCATGGTGATGCATCATCCTCTTTATTGCACAAAGATGCTTGGCTGTACTGAAACACAGGCATGGTAGGGAAAACACTGT ATTGCATTGCAAAACTTGCAGATGTAGCTGCAATCGAGTTCCAAGCTTTATTTGAGAGTATCATTCCAGGTTCGTCATCGGTAACCTTTGAAAAAAAGCC ATGCTTAATCTTGTCAGAAGTTCGGTTGATTTCTTCCTGCTCATACATAATGTAATTGTTGATCTCATTCCCCAGTGGTGCAACGGAATGTTGGCCCTGG AAGTTAATTGGCTTCTTGGTAAGAAGGTGGAGAACCTCATCTTTGAAGCAGCCAAGGGCTGCTTCAGCTAGGTGAGCTGCCTGTGGGGGTGCCAGTGTTG TAGCAATTTCAGCCATGAGATGAGAGAATGGCTTGTGGGTCACAGGGTCAATACCCATGCCTGATAGTTTCTTTTTCAGCTTTGTGTTCCAATGGTTTTT GACATCATTGTCAGTGCGTCCCGGTAGCTGAGCTGCTATTAGTGACCATCTGAAAACTCATTTTAGCAAATTATTTATGGAAGTTAGTCTAGTTCAAAGA GGGAAGTTAAGTACAATGATAGGCCAAAAGATTTTGAAAGATTTAGAGATAATGTTTTGTCAGAGAATGAGTTGATTCACCATAGAGCATTATGGTATTT TTCAATCTATGTAGTTAATTCTGTCTACTGAGATTTGAGATTTAAGGCTGTTGTATAATTAGATAAAGGAACACACACCCACAAAATAAAAATAGAAAAT GTTCATACCTGTTACCAAAAACTGAATGAAGTTTCACAATAGTTTGTTCCTCTGAATCCAAGAATTGGCCATGTTTAAGATCAGGACGAAGGTAGTTAGT CCATCTCAGCCTGCAGCTCTTTCCACATCTTTGGAGCCCTGCATCATAGACACAATCTAGTATTAAAGTTTGTTTTTATTGCAATATTGAGTTAAAATAT ACTTAGTATCCTTTTACATAGCAGATAGTTTATGTATTCAGAGCACAAGACTGTACCTAGCATTTATGTGTTGACAATCATTGGCTCTTTAAATATATGA ATTATTAGATGATATATAGACAGTATAAAATTGTAGTTCACAAATTGCTTTTAAAGAACGATAACTTAATAAAAACATTATTTTGTCAGCTGGAACCAGT GACATGTAATGTTGATGCTAATGTGTAACCATAGATGACATCTCAGTAATAAGAAGGAAGTATTAACTAAAATGTCACTTTTTAATCGAATGATTGAGAT TAACCAGCATTTTTCGGGATGAGACGCCAGTTTCGGGTGCCATGATGAGCAATGTAGGAAGAGAGCTTATTGTCTTCCTCTGGTGTCCACTGTCCTCTTT TAACGTTTTCCTTCTCACAGCATGGTATGCGCCCCATTTCTTTATTTCTTTCTTTTCAACTTGTTAACTCTTTTACTTGTACAAAATGCTAATTTTGAGG GCAGATAAGGTGAGATGAGTAGAATAATTGAGAGAAGTATCAAATATAAGAATCGTCTTTCTACTTTTGCAATTCTTTGAGGTTTTGGGAAGCCGTGGAA TATTTCTTTGGGTTGTTTATATCTTGTGTTATTTTATGGGTTATGGGTCATTATTCTTTATATATAAGTTATGCAAATTGGAATTGCATGGGGGTTCATG GTAAAGGCCGAAATGCATGAAAGGTGCATGATTTTATTAAAGAATTCAACGCCATTGAGTGTGTGGGTAGAGGCAGGTAACTCACCCACAAGATGCTTGA TCAATATCTCTTATTCTCTTTCTCTTTCTTTGTTGACTCTTTTGCTCATAATTTGTGTGTATATGTTGGGTAGGCTTCTGCTTTGATCACACAAAACTAA CTTAAGGGTGGAAGGGTTAGATCCTAACTCAGATCGCAAAGCTTGTTTCACGTGCGGGGGTCTTCATTTTTCTTGAACAATTTATTAGTTATGGATTTTG TTAAAGAAAAAATATGTATGCATTGACAATGTAAATATTTTTTACGCTATCATCAAATCACCACCATTGATTTGTT BLAST |
Tissue | flowers |
Gene name | LI_gene_85343; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115484
Blastp | Proteasome activator subunit 4 from Arabidopsis with 69.67% of identity |
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Blastx | Proteasome activator subunit 4 from Arabidopsis with 69.67% of identity |
Eggnog | Proteasome (Prosome, macropain) activator subunit 4(ENOG410XP7J) |
Kegg | Link to kegg annotations (AT3G13330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425529.1) |
Pfam | Proteasome-substrate-size regulator, mid region (PF16507.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |