Id Trinity | FTRINITY_DN59362_c1_g1_i3 |
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Name Transcript | Ll_transcript_115049 |
Sequence | ATTAGATGTTGCAAAGAGTATTGCTGTAGAAGTTCAGAGTGAGTCTAAATGGAAGCAGCTGGGAGAATTGGCCATGTCTAGTGGAAAGTTAGCAATGGCT GAGGAATGTTTGGAGCGTGCAATGGATTTAAGTGGGTTGTTACTGCTATACTCTTCTTTGGGAGATGCTGAAGGAATATCAAAACTTGCAACCCTTGCTA AGGAGCAAGGGAAGAACAATGTCTCATTCCTTTGCTTATTTATGTTGGGTAAACTTGAAGACTGCCTTCAACTGTTGGTAGAAAGCAATCGAATTCCAGA GGCAGCTTTAATGGCTCGATCTTATCTCCCAAGCAAGGTCTCAGAGATAGTGGCAATATGGAGAAAAGATCTTAATAAGGTTAATCCAAAAGCTGCTGAG TCCTTGGCTGATCCTGAGGAATATCCTAATCTGTTTGAAGACTGGCAAGTTGCACTTGCCGTTGAATCTAAAGCTGCAGAATCAAGGAATGTTTACCCTC CTGCAGAGCAGTACACCAGCCATGCTGACAAGTCACATGTTACCCTTGTTGAAGCCTTCAGAAACATGCAGATTGAAGAAGGAGACGGGCCTCTTGAGAA TGGGGACTCTAGTCACGAGTTATCAGAACAAAATGGAGAAGATGACTATGCAGAGGCACTGGAAGAACCAAATGGAGAGGAAGGAAGCCAAGAGGAGGCA GTTGTAGTGGATGCTGATTCTACAGATGGTGCAGTACTGGTTAATGGTAACGAGGCTGACGAAGAGTGGGGTACGAATAATGAAGGAGCCCCGTCAGCCT AAAAGCAATTGGTTGGGGTGGTGTGAAAATCGTAATTAAGTTCTGTGCTTGCACCACATCACTAGGTCCCATCAAGACAACCGGTTCCAGCTTCGGGGAT AATTATTTGAGGTCAACTCTATGGGCCATGAAGAGATTCTGCGGACTGGTTGTTTCTATTTCCTGGTATTGTGGTTTAGTAGTGCCCTGAATTTTGTCAT ATTGCGCTTGGTACAACAATATTCCTTAGGGTCAGTTAGTTACAAATTACTAGAGTTAATATCACATTCTTTCGAGGCTTTTACCTCATTATATATTCGT GCCACTGTGAATGTAGACAAGCTGAAAAAGAGATGATTGCCTGATTTAAATTTAGTTAGTTTCGATTTATTCTTGATTGTATTTCTTTCAAATCTATATA CTTTCTTGGATTGTAAACATGGATTGGTTCATAGAGAAAATAATGATTCTTCTACT BLAST |
Tissue | flowers |
Gene name | LI_gene_85438; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115049
Blastp | Coatomer subunit beta'-2 from Arabidopsis with 77.66% of identity |
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Blastx | Coatomer subunit beta'-2 from Arabidopsis with 77.66% of identity |
Eggnog | coatomer protein complex, subunit beta 2 (beta prime)(ENOG410XNNY) |
Kegg | Link to kegg annotations (AT1G52360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019436408.1) |
Pfam | Coatomer WD associated region (PF04053.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |