| Id Trinity | FTRINITY_DN59371_c2_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_113882 |
| Sequence | CACTAGTTGTTGAAAAAACTAACAATCTCCCACTTGGTCCATGTGATGACTTGAAGATTCATAACTTTAAATGCGCACTTTAATTGAACCTTACAAATCA TCGTCCTTAATTAAATTGAAATGATTGAATCATGGCGGTCACAAATTATATGAGGCAACCTGATCCCTTCCATGTACCACAATCAATTCAACTCAACTAA CTGTAATTGAGTTTTCATTTACCTTTCGAAAACTCACCAAGTCATCTCATTAACACCATACAAGTACATTCTTTAATATGGATAACTCTAAACTTTAATT ACGGAAATGAAACTTTCATTGAATTCAAATGTGTCATACAATAATAAGCAAACATCTATACATGTATATATACACCAGGTATTATCACATTAACAAGGAC TTATCCATAATGCCCATCCTTTCTACATGGCCAATGTAAATCTTGGGCGGTAATCCCTTAGTTAACGGATCCGCTACCATTAGATCGGTACCAATATGCT CTATAGACACCTTTTCATTCCGTACTTCTTCTTTAACTGACAGGAACTTTAAGTCCATATGTTTGGTACCTCTGGAATACCTGTCATTCTTAGAGAAGAA GACAGCTGCAGAATTATCACAATAAAACTTCAGCGGCCTAGCTGCATTGTCTATAATGCCAAGTCCTGAAGTAAAGTTCTGCAGCCACAATGCATGATTT GTGGCCTCAAAGCATGCCACAAACTCAGCCTCCATGGTGGACGTAGCAATTACGGATTGTCTACTACTTTTCCATGATATGGCACCTCCAGCCATTAGGA AGACATAACCAAATGTAGATTTCCGTGAGTCCACACATCCTGCATAGTCCGAATCCGAATAACCAATCACCTCTAGGTGATCTGTCCTTCTATACGTGAG CATGTGATCCTTAGTGCCTTGCAAATATCTGAGAACCTTCTTTGCAGCCTTCCAGTGGTCCATTCCAGGGTTACTTTGATATCGGCCTAACATTCCAACA ACAAAACTGATATCCGGCCGAGTGCATGTCTGAGCATACATTAAACTCCCGACCACTGATGCATAGGGAATAGATTTCATTTCCATACGTTCCAAATCAT TCGTTGGACATTGTTTTTCACTGAATTTATCCCCTTTCTGGATTGGAACTATCCCTGCAGAGCACTTTTCCATTCTGAATCTCTCTAATACCTTATTGAT ATATCCTTTCTGAGACAATCCCAACCATCCTTGTGATCTATCACGAAATATTTCTATTCCTATCACATAGGATGCCTCACCCATATCCTTCATTTCAAAA TTATTAGAGAGAAACTTCTTTACATCATGTAACAATCCTTTATCATTTGCAGCAAGCAGAATGTCATCAACATATAGGACTAATATTATAAATTTGCTGC CACTAACTTTCATGTAGATACACCGATCAACAGTGTTTTCCACAAATCCATATGACGTAATGGTATCACTGAACTTTATATACCATTGTCTGAAAGCTTG TTTCAGTCCATATATTGACTTATTTAATTTATACACTAGATTTTCCTTTCCTGTGATTACAAACCCTTCGGGTTGGTTCATATACACTTTCTCATTTAAG TCACCGTTCAGAAAAGCGGTCTTTACGTCCATTTGATGAAGCTCTAAGTCATAATGAGCCACCAAAGCCATAACAATTCTTAAAGAATCTTTCTTAGATA CCGGAGAGAAAGTTTCTTTATAATCAATGCCTTCTTTTTGAGTGAAACCTTTGGCGACAAGTCTAGCCTTATACCTTTCAATGTTGCCTTTCGAGTCACG CTTGGTCTTAAAGACCCATTTATAGCCAACGCATTTTGAACCCTCAGGCAACTCAGCTAGATCCCAAACTTTATTATCGTCCATTGATTTCAACTCTTCT TTCATAACATTGAGCAATTTTTCAGAATTATCACTTTCCATGACTTCTCTGAACGAGACTGGATCATTATCAATGCTTAAGTCACATTCATGTTCAAGTG AATACACAATATAATCGTTAGAAATAGCTGGTCTTCTTTGCCTTTCAGACCTCCTTAATGTTATTTCTTGCGGTTCTTCCATCACTTGGTCACTAACGAC TTCATTAATTGGTTCATTAACTATCTATTCATCATGTGAGTTTTGGATATTATCTTGTTGTCTCTGTATGTTATTTGACGGTAATATAACCAGAGGAACA ACAATCTCATGAGACATCTTCGGTGAAGAAGATTTATCAGAAGTCTCTATAATATCCACCTTTCGTGATTTATCACTCCCACTGATTTGACCATTCTCAA TGAACCTAGCATTTCCAGACTCAACTATTCTCGTACTATGGTTAGGACAATAAAACCTGTACCCTTTTGACTTTTCTGGATAGCCGATAAAGAAACCACT AATGGTTCTTGCATCAAGCTTCTTTTCATGTGGGTTGTACACCTTTATTTCTGCTGGACAACCCCAAACATGGAGATGTCTCAAACTGGGTTTCCTACTG TCCATAACTCATACGGAGTTTTAGGAACTGCCTTACTCGGAACCCTATTTAGCAGATACACAGCGGTCCTTAATGCGTACATCCACAACGATAAAGGTAC ATCACAATGACTTAACATTGACCTAACCATTTCCATTAGAGTACGATTCCGCCTTTCAGCCACACCATTTTGTTGCGGTGTGCAAGGCATAGTGTATTGA GCACATATGCCTCGACTTTCGAGAAACTTTGCAAATGGTCCTGGACATTGTCCATTCTCATTATATTTTCCATAATATTCACCACCTCTATCAGACCTCA CAACTTTAACCTTCTTTTCAAGTTGCCTTTCAACCTCATCAATGAATCCCTTTAGGACATCCAATGATTGAGATTTTTCATGCAACAAATATAGGTAATA ATAATGTGAGTAATCGTCTATAAAAGTTATGAAATACTTTTCACCACCCCAAGATGGAACATCAAAAGGACCACAAATGTCTGTATGTATCAATGCAAGA AGTTTGCTACTTCTTGTGGCTGGGTTCTTTCATATGTGTTTAGTTTGTTTTCCTTTAATACAATCTAAACAAACATCCCAATTGCCAAAATCCAAATGAG GTAAAATCTCACTTTTCGTTAACCTCGTTATCCTTTCTTTGGATATATGGTCTAGTCTTTGATGCCACAAGTAAGGAGAATTCTTATCAAAATCTTTAAG CTTGCTACCAACTTCATGTTCAACATTAAATAAAGATTCCTTAAAATTAAAATCAAGATTGAAGCAATATAAATCATTCATTAAAGTACCAAAACCATAA TAGTACGAATGTTTATACAATTTAAAACCAGAATGCTCAATCTTAAAATTAAAACCTATACAATCCAGCCTAGCAACAGAAACCAAGTTCCTAGAACATT CAGGAACATAAAGACACTTTTCTAGATCTAAATAGTTTCCACTATCTAGGATCAATCTATATGTTCCAATTCCATGAACTCGTGCCTTCATTCTGTTCCC CATGTAAAGAAACTTCTCAGTTTCCTGGGTTCGGATTGAAAGGAATCTCTTTCTTTTCGAACCATTTCTTCCTTTTAGGACAATCCTTCTTATAGTGCCC ATTCTTTTTACAAAAGAAGCACTTCATTTCTTTATGGATTTTCCCTTCTTTAATGGAGATCTTTTCCTTCCCCTTTCCTTTCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_85505; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_113882
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 45.34% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 41% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020997393.1) |
| Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |