| Id Trinity | FTRINITY_DN59378_c6_g3_i3 |
|---|---|
| Name Transcript | Ll_transcript_115615 |
| Sequence | CTAGAACTATTACATGTGCTAGCTAGGCATCCAAATTCCAAAAAAACAATTTGTTTCAGCTGGAATTTTGTCTGAATTATTTGAGAATAACATTCATCAA GGTCCTAAAGCTTCCCGTTTCCAAGCAAGGGCAGTCCTTTGTTCTTTATCTGAGGGTGATGTAAATGCGGTTACTAAATTGAACAGTCTTCTACAAAAGA AAGTCATGTACTGCCTTGAGCATCATCGCTCCATGGACATTGCTGTGACTACACGTGAGGAGATGTTATTACTTTCTGAGGTGTGTTCTTTGGCTGATGA ATTCTGGGAGTCAAGGCTACGCATTGTATTTCAGTTGTTGTTTTCTTCTATTAAGTTGGGTGCAAAGCATCCTGCTATATCTGAGTATGTCATTCTTCCA TGCCTTAGAATTGTATCTCAGGCATGTACACCTCCAAAACCTGATACACCAGAGAAAGAGGATGGCCTTGGTAAGCCTTCTGTACAGACAAAGGATGAAA GCGATTCGAATGTATCTGGGTCTATAACTAGTGCTGTTGTTGGGACCAAGTCATTCTGTGATCCATCAGAAAGAAATTGGGATGCCACTCCGAAGACTCG GGATATTCAGTTACTTAGCTATTCAGAATGGGAGAGGGGAGCTTCCTATCTGGATTTTGTTAGGAGGCAATACAAAGTTTCTCAGGCTGTCAAAGGTGCT GGGCAGAGGTTACGAAGCCAAAGACATGACTACCTGGCACTTAAATATGCTCTGAGGTGGAAGCGCCGTGCCTGTAAAACAGCTAAAAGTGACTTATCAT CAGTGTTTGAGTTGGGATCATGGGTTAAAGAACTTATTCTCAGTGCTTGTTCTCAATCCATTAAATCAGAGATGTGCATGCTTATAAGCTTGCTTTGTGC CCAAAGTTTATCCAGGAAATTCCGGTTGCTGAACCTATTGGTGTCTTTGTTACCTGCAACACTTTCTGTGGGTGAAAGTGCTGCAGAATATTTTGAGTTA TTATTCAAGATGACTGATTCAGAGGATGCTCGTCTATTTCTGACTGTTCGAGGCTGTTTACAGACAATTTGTACTCTAATTACCCAAGAAGTAAGCAAGG TTGAGTCTCTGGAAAGGAGTCTGCACATTGATATATCTCAGGGATTTATCCTTCACAAGCTCATAGAGCTTCTTAGTAAATTTCTAGAGGTTCCAAATGT CAGATCCAGATTCATGCGAGATTGCTTGCTTTCTGAAGTTCTTGAAGCGCTTATTGTAATCCGTGGCTTGATAGTTCAAAAGACAAAGTTGATAAGTGAT TGCAGTCGGCTTCTAAAAGATCTTTTAGATAGTCTACTGCTAGAAAACAGTGAAAATAACCGGCAGTTCATCAAGGCCTGTATCAATGGTTTGCAAATAC ATGGGGAGGAGAGGAAGGGGCGTGCTTGTTTGTTTATCTTAGAGCAGCTATGCAATCTTATCTGCCCGTCAAAGTCCGAACCTGCATATTTCTTGGTCCT CAACAAGGCTCATACCCAGGAAGAGTTTATTAGGGGATCAATGACTAAAAATCCTTATTCAAGTGCTGAAATTGGTCCATTGATGCGCGATGTTAAGAAT AAGATTTGCCATCAGTTGGATTTGTTAGGTCTTGTTGAGGATGACTATGGAATGGAGTTGCTAGTAGCTGGCAATATCATCTCTCTTGATTTGAGCATTG CACAAGTTTATGAGCTAGTCTGGAAGAAATCAAAAACATCTTCAAACAATATGACTAATTCCTACTTGTTGTCTCCAAATACTGTTGCCTCATCCAGAGA TTTCCCACCTATGACAGTTACATACCGCCTCCAGGGATTGGATGGTGAAGCAACTGAGCCTATGATTAAGGAGTTGGAGGAAGATAGAGAAGAATCTCAG GATCCAGAGGTTGAATTTGCTATAGCAGGTGCTGTTCGTGAATGCGGTGGATTAGAGATACTATTGGGCATGATTCAGCGTCTGCGAGATAATTTCAAGT CCAACCAGGAGCAATCGGTTGCAGTTCTTAATCTTCTTATGTACTGTTGCAAAATTAGAGAAAATAGACAGGCTTTGTTGAGGCTAGGAGCTTTAGGCTT ACTTCTTGAGACAGCAAGGAGGGCTTTCTCAGTTGATGCCATGGAGCCAGCTGAAGGCATTCTTTTGATTGTTGAAACTCTGACATTAGAAGCAAATGAA AGTGACAATATAAGCATCACTCAAAGTGCCCTTACTGTCACTAGTGAAGAAGCTGGGACAGGTGAACAAGACAAGAAGATAGTTCTCATGTTCTTGGAGA GATTGTCTCATCCATTGAGCCTTAAGAAATCAAACAAACAACAGAGAAACACGGAGATGGTTGCTCGGATATTGCCTTACTTGACTTATGGTGAACCTGC TGCCATGGATGCTCTCGTCCAACATTTTAGCCCTTACTTGCAAGATTGGGGAGCATTTGACCTTTTGCAGAAACAGCACCTGGACAATCCAAAAGACGAA AGCATTGCTCAGCAAGCTGCAAAGCATAGGTTCACTCTAGAAAATTTTGTTAGGGTTTCAGAGTCACTGAAGACAAGTTCCTGTGGGGAGAGACTGAAGG ATATTATCCTAGAGAAAGGTATAACTGGAACTGCAATAAGACATTTGAAAGATAATTTTGCCAATGCAGAGCAGGCTGGTTTCAAGGCTGGTGCTGAATG GGGACCGGGATTAAAATTGCCGTCCATCCCTCTTATATTGTCTATGCTGAGAGGTTTGTCAATGGGCCATCAGCTCACTCAAAGGTGCATTGATGAGGAA GGTATCTTACCCTTGCTGCATGCCTTAGAAAGAGTTTGGGGAGCAAATGAGATTGCAGAAAGGGCTGAAAATTTGCTGGACATGCTATCTAACAAGGAAG GAAAAGGAGATGGATTCTTGGAGGAGAAGGTGCGTAACTTGCGGCATGCTACTAGGGATGAAATGAGGCGCCGGGCTTTGCAGAAGAGACAAGAGCTGCT TCAGGGGCTTGGGATGCGTCAAGAACTGTCTTCAGATGGAGGTGAACGCATTGTTGTTTCCCAGCTAGTCCTTGAAGGTCTGGAAGATGTGCAAGAGGAG GAGGATGGGCTGGCATGTATGGTATGCCGGGAGGGATATAGTTTAAGGCCTTCTGATTTACTTGGTGTTTACTCTTACAGCAAGCTTGTGAATCTAGGTG TTGGTGCTTCCGGAAGTGCTCGTGGAGATTGTGTTTACACTACTGTTAGTTACTTCAATATGATTCATTTCCATTGTCACCAAGAAGCCAAAAGAGCAGA TGCTGCCTTGAAGAATCCTAAGAAAGAGTGGGAAGGGGCTACCCTTAGAAATAACGAATCTCTCTGTAATTCTTTATTCCCTGTCAAAGGTCCATCTGTC CCACTTGCACAGTATATTCGCCATGTCGAACAGTATTGGGACAACCTCAGTGTTCTTGGACGAGCTGATGGAAGCAGGCTCCGTCTGCTCACTTATGACA TTGTTCTGATGCTGGCTAGGTTTGCAACAGGAGCATCATTCAGTGTAGATAGCCGAGGTGGGGGACAGGAAAGCAATTCTCGGTTCCTTCCATTTATGAT CCAAATGGCACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_85574; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115615
| Blastp | Auxin transport protein BIG from Arabidopsis with 79.51% of identity |
|---|---|
| Blastx | Auxin transport protein BIG from Arabidopsis with 79.03% of identity |
| Eggnog | Ubiquitin protein ligase E3 component n-recognin 4(ENOG410XPP8) |
| Kegg | Link to kegg annotations (AT3G02260) |
| CantataDB | Link to cantataDB annotations (CNT0002836) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452981.1) |
| Pfam | E3 ubiquitin-protein ligase UBR4 (PF13764.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |