Ll_transcript_114648

• Id Trinity: FTRINITY_DN59379_c1_g1_i2
• Name Transcript: Ll_transcript_114648
• Sequence: ACCTTCGGAAAATGCAGAGATAGATTCTGCCCATCTCTCTAGAGCAGTTAAGTCTGCCAAAACAGCCTTGAAAAGCCCCATCATCTCAATGGATAGAAGG CATTCTACTTCAAGGAGAAATCTCCAAGTACTTGAAGTAATTGAAGACAACAGTCCATTGCCTAGTATGCTTTCTCCACAAGATTATGCTGGTCGTAGTG GAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGTGGGCATTTCTGTTTCATTGCGGCGTTCAGAAGTTTACAGCCCTGGGATTTC TCTGCTTGAACTGGAAAACAAGGAACGCATTGATGTCAAGGCTTTCAATTCTGATGGATCTTACTACAAGCTTTCAGCATTGTTGAACATGACCTCAGAC AGAACAAAGGTGGTTCATTTCCAACCACACACAATGTTCGTTAATAGGGTTGGATGTAGTCTCTGCCTGCAGCAATGTGATTCTCAGTCAGTTGTATGGG TACATCCTACTGACCCTCCAAAACCTTTTGAGTGGCAGTCATCAATCAGAGTTGAACTTTTGAAGTTGCGGGTTGATGGCTATAAATGGAGTACACCATT TAGTGTTAGCTATGAAGGTGTAATGCGCATTAACTTGAAAAAAGATGATGGAGGTGACTCAATGCAATTAAGGGTTGCAGTAAGAAGTGGTGCCAAGAGA TCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACAGGATTGAAAATCGCTCCATTTTATCGCCCATCCACTTTCGCCAAGTTGACG GTGTTGGTGATTCCTGGCAGCTGCTCCTTCCGAATTCAGCTGCTTCATTTTTATGGGAAGATCTTGGTAGAAGACGTTTGTTGGAACTCTTTGTAGATGG TACTGAGCCAAGGCAATCACTGAAGTATGATATTGATGAAATTTCTGATCATGAGCCCGTAAGTTCAGCAGATGGACCAACCAGAGCCTTGCGTGTTACT ATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGATTGGATGCCAGAAACTGAACCTGCAGGAGTTCTGGGTAGGAGGAATTTATCATCAATGA GTGACAATCAAAAGCAACAACTAATGTCAATTACAAATTCTGAATTCCACATTAATTTTGATCTTGCTGAGCTTGGGATATCTGTTATAGATCATACGCC TGAGGAAATTTTATACATGTCTGTTGAGAATCTTGTTCTGGCATATTCAACTGGTCTGGGATCCGGAATTAGTAGATTTAAACTCAGAATGACCGGGTTA CAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGCCACAGAAAGCTGTGGCAGAAACTGATTATATCCTGAAATGTTCTGTGACAA TGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCTTCATGGGCCAGAAAGTTCTTCTGCCTTTTTGGTAAACATTCATGAACCTGT TATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTGTACGATTCTCAAATAACTGCTGCATCAGTTGATCCAATCATTCAAATTGGC GTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCACCCAGTCAAAGACCAAGGGGTGTGCTTGGGTTCTGGGCATCCTTAATGACTG CATTGGGTAACACAGAAAATATGCCTGTTAGGATAAACCAGAGGTTTCATGAGAATATTACCATGAGGCAGAGTGCTATGATTAGCATGGCTATTTCAAA CGCTCGGAAGGATCTTCTTGGTCAACCACTTCAGCTGCTCTCAGGTGTTGATATATTGGGCAATGCAAGTAGTGCACTTGGACATATGAGTAAAGGTGTG GCTGCATTGTCTATGGATAAGAAGTTCATTCAAAGTCGGCAGAGACAGGAAAACAAAGGTGTGGAGGATTTTGGTGATGTTATTAGAGAGGGAGGTGGAG CGTTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCCGCTTGAAGGAGCAAAAACTTCTGGTGTTGAAGGTTTTGTTCAGGGTGTTGG GAAAGGTATTATTGGTGTAGCTGCACAACCAGTGAGTGGAGTTCTTGATCTTCTTTCAAAAACAACCGAAGGTGCTAATGCTATGAGAATGAAAATTGCA TCTGCTATAACATCTGATGAACAACTTCTCCGAAGGAGATTGCCTCGTGTTATAAGTGGTGATAATTTGCTTCGACTATATGATGATTACAAAGCTCAAG GACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTTGGCCAGGTTGATCTTTTCAAAGTTCGGGGAAAGTTTGCCTTAACAGATGCTTATGAAGA TCACTTTATGCTTCCGAAAGGGAAAATTCTGATGGTCACTCATAGAAGAGTCATACTATTGCAACAACCATCCAATATTATTGCTCAGAGGAAGTTCAGC CCTGCAAGGGATCCATGTTCAATTCTGTGGGACATAATGTGGGATGACCTCGGTACGTTGGAACTGACACACGGAAAAAAAGACAACCCAAAAGGTCTAC CTTCACAACTCATCTTATATTTGCAATCTAGATCAATGGATATGAAAGAAAATGTTCGAATAGTAAAATGCACCCCTGAATCCCATCAAGCGCTTGAAGT TTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCAAAGGGAATACTGAAAAATAAAGTGACAAAACCATATTCACCACTTGCTGCT GATGGTCCTAGTTCTGGTGTTGATTTAATAGCAAAAGATGGGGCTTCGCCCTGGTCCTCTCAACAGATGCCTGGATCTGCTCCCCTCTCTTCAACTTTCG GAAGCAGAACTGATCATAATGACTGAGTTTTCACTATACATTGTTCTGTTCATCACCTTCAACTTAATCAATGACCTGTGTCTGGCAGTCCAGCTGGAAT GCTCTCGATCAAAGTTCATCAGATCAGTCTGGGCTGATTTTTCTCAACCCAGCAGTCTTCCGGTCAATCAGTACACAGACAGATGAACCAAGTTGCTCTT CAGTTTGGAAGTGAAAGATTTTGCATCCGGGAGAGAAGTTTATGTTTTGAACTTTTTATTTTATTAAAACTAACATGTAATTGGTGTATGTTGGGTTCAT ATTTTTATTTATTGATACTAAGTATTATATTTTTTATATATTTAAATTATTATGTTTTTTTTGTATTGGATATATTTTATATTATATTACAATTTTTTAG GGGAATGATCAAGTTAC
• Tissue: flowers
• Gene name: LI_gene_85580;
• Additional information: details;

Expression of Ll_transcript_114648

FPKM

• FPAB: 2.6
• FPNAB: 2
• LF1: 1.8
• LF2: 1.6
• LF3: 1.2
• LF4: 1.3
• UF1: 0.6
• UF2: 1.5
• UF3: 3.2
• UF4: 2.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_114648

• Blastp: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Blastx: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Eggnog: Vacuolar Protein(COG5043)
• Kegg: Link to kegg annotations (54832)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418850.1)
• Pfam: SHR-binding domain of vacuolar-sorting associated protein 13 (PF06650.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;