Ll_transcript_114649

• Id Trinity: FTRINITY_DN59379_c1_g1_i3
• Name Transcript: Ll_transcript_114649
• Sequence: ACCTTCGGAAAATGCAGAGATAGATTCTGCCCATCTCTCTAGAGCAGTTAAGTCTGCCAAAACAGCCTTGAAAAGCCCCATCATCTCAATGGATAGAAGG CATTCTACTTCAAGGAGAAATCTCCAAGTACTTGAAGTAATTGAAGACAACAGTCCATTGCCTAGTATGCTTTCTCCACAAGATTATGCTGGTCGTAGTG GAGTTACAATGTTTCAATCTCAAAAAGATACATATTTGTCACCAAGGGTGGGCATTTCTGTTTCATTGCGGCGTTCAGAAGTTTACAGCCCTGGGATTTC TCTGCTTGAACTGGAAAACAAGGAACGCATTGATGTCAAGGCTTTCAATTCTGATGGATCTTACTACAAGCTTTCAGCATTGTTGAACATGACCTCAGAC AGAACAAAGGTGGTTCATTTCCAACCACACACAATGTTCGTTAATAGGGTTGGATGTAGTCTCTGCCTGCAGCAATGTGATTCTCAGTCAGTTGTATGGG TACATCCTACTGACCCTCCAAAACCTTTTGAGTGGCAGTCATCAATCAGAGTTGAACTTTTGAAGTTGCGGGTTGATGGCTATAAATGGAGTACACCATT TAGTGTTAGCTATGAAGGTGTAATGCGCATTAACTTGAAAAAAGATGATGGAGGTGACTCAATGCAATTAAGGGTTGCAGTAAGAAGTGGTGCCAAGAGA TCACGCTTTGAAGTTATTTTTCGTCCAAATTCATTGTCAAGTCCTTACAGGATTGAAAATCGCTCCATTTTATCGCCCATCCACTTTCGCCAAGTTGACG GTGTTGGTGATTCCTGGCAGCTGCTCCTTCCGAATTCAGCTGCTTCATTTTTATGGGAAGATCTTGGTAGAAGACGTTTGTTGGAACTCTTTGTAGATGG TACTGAGCCAAGGCAATCACTGAAGTATGATATTGATGAAATTTCTGATCATGAGCCCGTAAGTTCAGCAGATGGACCAACCAGAGCCTTGCGTGTTACT ATTGTAAAGGAAGAGAAAATCAATGTTGTTAAGATCAGTGATTGGATGCCAGAAACTGAACCTGCAGGAGTTCTGGGTAGGAGGAATTTATCATCAATGA GTGACAATCAAAAGCAACAACTAATGTCAATTACAAATTCTGAATTCCACATTAATTTTGATCTTGCTGAGCTTGGGATATCTGTTATAGATCATACGCC TGAGGAAATTTTATACATGTCTGTTGAGAATCTTGTTCTGGCATATTCAACTGGTCTGGGATCCGGAATTAGTAGATTTAAACTCAGAATGACCGGGTTA CAGGTGGACAATCAATTGCCGTTAACTCCAATGCCGGTTCTATTCAGGCCACAGAAAGCTGTGGCAGAAACTGATTATATCCTGAAATGTTCTGTGACAA TGCAGTCAAATGGATCGTTGGATCTTTGTGTCTATCCATACATTGGTCTTCATGGGCCAGAAAGTTCTTCTGCCTTTTTGGTAAACATTCATGAACCTGT TATTTGGCGCCTTCATGAAATGATCCAACAGGTGAAGCTCAGTAGGCTGTACGATTCTCAAATAACTGCTGCATCAGTTGATCCAATCATTCAAATTGGC GTGCTTAATATGTCTGAAGTTCGACTCAGAGTGTCAATGGCTATGTCACCCAGTCAAAGACCAAGGGGTGTGCTTGGGTTCTGGGCATCCTTAATGACTG CATTGGGTAACACAGAAAATATGCCTGTTAGGATAAACCAGAGGTTTCATGAGAATATTACCATGAGGCAGAGTGCTATGATTAGCATGGCTATTTCAAA CGCTCGGAAGGATCTTCTTGGTCAACCACTTCAGCTGCTCTCAGGTGTTGATATATTGGGCAATGCAAGTAGTGCACTTGGACATATGAGTAAAGGTGTG GCTGCATTGTCTATGGATAAGAAGTTCATTCAAAGTCGGCAGAGACAGGAAAACAAAGGTGTGGAGGATTTTGGTGATGTTATTAGAGAGGGAGGTGGAG CGTTTGCTAAAGGTTTATTTAGAGGGGTAACTGGCATTTTAACAAAGCCGCTTGAAGGAGCAAAAACTTCTGGTGTTGAAGGTTTTGTTCAGGGTGTTGG GAAAGGTATTATTGGTGTAGCTGCACAACCAGTGAGTGGAGTTCTTGATCTTCTTTCAAAAACAACCGAAGGTGCTAATGCTATGAGAATGAAAATTGCA TCTGCTATAACATCTGATGAACAACTTCTCCGAAGGAGATTGCCTCGTGTTATAAGTGGTGATAATTTGCTTCGACTATATGATGATTACAAAGCTCAAG GACAGGTCATATTGCAGTTGGCAGAATCAGGTTCTTTTTTTGGCCAGGTTGATCTTTTCAAAGTTCGGGGAAAGTTTGCCTTAACAGATGCTTATGAAGA TCACTTTATGCTTCCGAAAGGGAAAATTCTGATGGTCACTCATAGAAGAGTCATACTATTGCAACAACCATCCAATATTATTGCTCAGAGGAAGTTCAGC CCTGCAAGGGATCCATGTTCAATTCTGTGGGACATAATGTGGGATGACCTCGGTACGTTGGAACTGACACACGGAAAAAAAGACAACCCAAAAGGTCTAC CTTCACAGCTCATATTATATTTGCAGTCTAGATCAATGGATATAAAAGAAAATGTTCGCTTCATAAAGTGCACCCCTGAATCCCATCAAGCACTTGAAGT GTACTCTTCAATTGAGCATGCATTGAGTACTTATGGCCCAGGTGCATCAAAGGGAATACTGAAAAATAAAGTGACAAAACCATATTCACCATTTGCTGCT GATGCTCCTAGTTCTAGTATTGATTTAATAGCAAAAGATGGGGCTTCCCCATGGTCCCCCCAACATATGCCTGGATCTGCTCCCCTCTCTTCAACTTTTG GAAGCAGGACCGATCCTAATGACTGAGTTTTCACTGTATGTTGTTCATCATATTCAGCAACTTAACTGATGCCCTGCCTCTGACCGTCAAGCTGAAATCC ACTAGATCGAAATTCATCAAACCAGTCTGGTTCAAGCTCTTAATTCCAGATGACATCAGTTCAATCACATTACAAACAGAGATGAGTCAAGTTGCCCTTA AGTTTTGAAGGTATCAATTTTTGCATTTTCCTCACGATCTACTGAGGCTTGGGATGACAGTGCTGGTTTCTTGAGCTATATCCCTCTCCAATCATGGTTT AGCTTAAGGAAATTGGTTAAAAATCTATGAAGTGTTGTGATTCTTAGCAGGTTTAGGTTTGGCTGCCATTGCACCATGTCCATTAGTAATTGTATAGTAT TGGCCGAAGTAGTTTTCGTTGTACAGATACAAAATATCATTTAGGACCCTACTTATCCTATTGATGCAGCTTTCAAGATTTATTGAAACGCCAATGATAT ACTACTGTTTTGCATACAGGAATACCATCTGAATTGTTTTCCTCTATTGAGGAAATATTCTTAAATTTTTGTCTATGCTCCGTCATTTATAAAGGTTACA AGGGATAAGGGATCATCTGCAAAATAAAAGGTGAATAAGGAATCAGACGTTATCTACTCATGATTGGACTAGCCCTGCTTTTTAGTTTTGAGTATACTTA CCCAACTATCAGGGTATAACTAACAACTATGGCTCTCTGTGGATTGAACTGTGATTCTCCTCTGGGATCATAGTATGCCTCTAATACTATGCTAACCCTT CTGGGTTTTGAAGTAAGCATCTAAAAGCAATTAAAGGTGCCAACAAGTTGAGTAACATGTGATATTTTTCTTTTCTTTGTGTTTACACTTTACCGGTTCG GTTTTGAACAAAAATGAAATTAAAATTAAAGACTTCATTTTACTATTGTATTTTATGGTTCTTAAATTTTTCCCTTCTTCCTTACTCTTCAAAACTCAAA AGCTAATTTGTAAACAATTTCTTTCTCT
• Tissue: flowers
• Gene name: LI_gene_85580;
• Additional information: details;

Expression of Ll_transcript_114649

FPKM

• FPAB: 6.7
• FPNAB: 4.9
• LF1: 3.8
• LF2: 2.8
• LF3: 3.5
• LF4: 4.5
• UF1: 2.6
• UF2: 2.6
• UF3: 4.7
• UF4: 4.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_114649

• Blastp: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Blastx: Vacuolar protein sorting-associated protein 13C from Homo with 36.59% of identity
• Eggnog: Vacuolar Protein(COG5043)
• Kegg: Link to kegg annotations (54832)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418850.1)
• Pfam: SHR-binding domain of vacuolar-sorting associated protein 13 (PF06650.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;