Ll_transcript_115820

• Id Trinity: FTRINITY_DN59388_c3_g1_i2
• Name Transcript: Ll_transcript_115820
• Sequence: ATTGGCAATTGAGTGATCAGACTAGTGGGGGTTTATTAACTCCCTCCCTCTCACTTCATGGGTAGTTTCCGTGATAGTGGAGGAATTACAACGTCTGATA ACTCCTCCTAAGCTCTTCTATAAATTGAGGCACTCATGCATTGAAAAACCGTTCCATCTAATTCATTTTGCTGTCTCATAAAGAGAAACACAAAGTAAGG AAAGTTGAGTGCCATAGAGAGAAGGGAGGAAACTGAGTAGTTCCTATTCATCAAGGAACACATAAAGGGAAGGCAGAGAGGTGAGAACAAAGCAACCAAA AATGCAACAAGAAAAGCAATCAGAAAAGCTATTGGAACCAGCTTCATTCAATGCATTCGCCTTAGGCAACAGATGTGTCAAGTTCAATAGACTGAATTAT GCTGATTGGTCCGAACAGATCCAGTTCCAACTGGGTGTTTTGGAGTTGGAATTGGCCATCATTATAGATAATGAACCAACCATAACTGAGACCAGCTCGG AGGCAGACAAGACTCTTTATGAGGCTTGGGAGCGGTCTAACATGTTGAGTCTTAGCTTGATGAAAATTTCAATCTCTGACAATGTCAAGTCGTCTATGCC TAAGACGAATAATGCAAGGGAATTTATGAGAATGATCAAGGAGTACTCCCAATCAAACATTACTGATAAGTCTGTGGTAGGAAATCTCATGACAGAGCTG ACGACCAAGAAATTTGACTGGTCGCAGCCTATTCATGATCATGTAACAAGTATGGCAAATCTGACTGCCAAAATGAAAGGCATGGGGATGGAAGTGACAT AAGAATTCTTAGTATAGTTCATTATTAACTCCCTTCCTGTTGAGTTTGGCCAATTCCAGGTGAATTATAACACCATAAAGGAGAAATGGAATTTTCAAGA AGTAAAGGCCATGCTTGTTCAGGAGGAGGGGAGGTTAAAGAAAATTAAGAATGACTCTGTTCACTTGTCCATTCAGGAGCCAGGTAGCACCATCAAATTC AGACCAAGCAATAGGAATAAAGGAAAGGGGAAGGAAAAGATCCCATTAAAGAAGGGGAATCCATAAAGAAATGAAGTGCTTCTTCTGTAAGAAGAATGAG CACTATAAGAAGGACTGTCCTAAAAGGAAGAACTGGTTCGAAAAGAAAGGTAAACATTTTGTTTCCATTATAGATGAATCATTTCTTACTGAGGTTCCTA ATAATACTTGGTGGTTAGATTCTGGTGCAACAACTCATGTGTCACATATTGTGTAGAGATTCCTTTCAATTCGAACCCAGGAAACTGAGAAGTTTCTTTA CATGGGGAACATAATGAAGGCACAAGTTCATGGAATTGGAACATATAGATTGATCCTAGATATGGAAACTATGTAGATCTAGAAAAGTATCTTTATGTTT CTGAATGTTCTAGGAACTTGGTTTCTGTTGCTAGGCTGGATTGTATAGGTTTTAATTTTAAGATTGAGCATTCTGGTTTTAAATTGTATAAACATTCGTA CTATTATGGTTCTGGTACTTTAATGAATGATTTATATTGCTTCAATCTTGATTTTAATTTTAAGGAATCTTTATTTAATGTTGAACATGAAGTTGGTAGC AAGCTTAAAGATTTTGATAAGAATTCTGCTTACCTGTGACATCAAAGACTAGGCCATATATCCAAAGAAAGGATAATGAGGTTAACGAAAAGTGAGATTT TACCTCATTTGGATTTTGGCAATTGGGATGTTTGTTTAGATTGTATTAAAGGAAAACAAACTAAACACATATCAAAGAACCCAGCCACAAGAAGTAGCAA ACTTCTTGAATTGATACACACAGACATTTGTGGTGCTTTTGATGTTCCATCTTGGGGTGGTGAAAAGTATTTCATAACTTTTATAGACGATTACTCACGT TATTGTTACCTATATTTGTTGCACGAAAAATCTCAATCATTGGATGTCCTAAAGGTATTCATTGATGAGGTTGAAAGGCAACTTGAAAAGAAGGTTAAAG TTGTGAGGTCTGATAGAGGTGGTGAATATTATGGAAAATATAATGAGAATGGACAATGTCCAGGACCATTTGCAAAGTTTCTCGAAAGTCGAGGCATATG TGCTCAATACACTATGCCTTACACACCGCAACAAAATGGTGTGGCTGAAAGGCGAAATCGTACTCTAATGGAAATGGTTAGGTCAATGTTAAGTCATTGT AATGTACCTTTATTGTTGTGGATGTACGCATTAAGGACCACTGCGTATCTGCTAAATAGGGTTCCTAGTAAGGCAGTTCCTAAAACTCCCTATGAGTTAT GGACTGGTAGGAAACCCAGTTTGAGACATCTCCATGTTTGGGGTTGTCCAGCAGAAGTAAAGGTGTACAACCCACATGAAAAGAAACTTGATGCAAGAAC CATTAGTGGTTTCTTTATCGGCTATCCAGAAAAGTCAAAAGGGTACAGGTTTTATTGTCCTAACCATAGTACGAGAATAGTTGAGTCTGGAAATGCTAGG TTCATTGAGAATGGTCAAATCAGTGGGAGTGATAAATCACGAAAGGTGGATATTATAGAGACTTCTGATAAATCTTCTTCACCGAAGATGTCTCATGAGA TTGTTGTTCCTCTAGTTATATTACCGTCAAATAATATACAGAGACAACAAGATAATATCCAAAACCCACATGATGAACAGATAGTTAATGAACCAATTAA TGAAGTCGTTAGTGATCAAGTGATGGAAGAACCGCAAGAAATAGCATTAAGGAGGTCTGAAAGGCAAAGAAGACCAGCTATTTCTAACGATTATATTGTG TATTCACTTGAACATGAATGTGACTTAAGCATTGATAATGATCCAGTCTCGTTCATAGAAGCCATGGAAAGTGATAATTCTGAAAAGTGGCTCAATGCTA TAAAAGAAGAGTTGAAATCAATGGACGATAATAAAGTTTGGGTTCTAGCTGAGTTGCCTGAGGGTTCAAAATGAGTTGGTTGTAAATGGGTCTTTAAGAC CAAGCGTGACTCGAAAGGCAACATTGAAAGGTATAAGGCTAGACTTGTCGCCAAAGGTTTCACTCAAAAGGAGGGCATTGATTATAAAGAAACTTTCTCT CCGGTATCTAAGAAAGATTCTTTAAGAATTGCTATGGCTTTGGTGGCTCATTATGACTTAGAGCTTCATCAAATGGACGTAAAGACCGCTTTTCTGAACG GTGACTTAAACGAGAAAGTGTATATGAACCAACCCGAAGGGTTTGTGACCATAGGAAAGGAAAATCTAGTGTGTAAATTAAATAAGTCAATATATGGACT GAAACAAGCTTCCAGACAATGGTATATAAAGTTCAGTGATACCATTACGTCATATGGGTTTGTGGAAAACACTGTTGATCGGTGTATCTACATGAAAGTT AATGGGAGCAAGTTTATAATATTAGTCCTATATGTTGATGACATTCTGCTTGCTGCAAATGACAAAGGATTGTTACATGATGTAAAGAAATTTCTCTCTA ATAATTTTGAAATGAAGGATATGGGTGAGGCATCCTATGCGATAGGAATAGAAATATTTCGTGATAGATCACAAGGATGGTTGGGATTGTCTCAGAAAGG ATATATCAATAAGGTATTAGAGAGATTCAGAATGGAAAAGTGCTCTGCAGGGATAGTTCCAATCCAGAAAGGGGACAAATTTAGTGAAAAACAATGTCCA AGGAATGATTTGGAACATAAGGAAATGAAATCTATTCCCTATGCATCAGTGGTCGGGAGTTTAATGTATGCTCAGACATGCACTCGGCCGGATATCAGTT TTGCTGTTGGAATGTTAGGCCGATATCAAAGTAACCCCGGAATGGACCACTGGAAGGCTGCAAAGAAGGTTCTCAGATATTTGCAAGGCACTAAGGATCA CATGCTCACGTATAGAAGGACAGATCACCTAGAGGTGATTGGTTATTCGGATTCGGACTATGCAGCATGTGTGGACTCACGGAAATCTACATTTGGTTAT GTCTTCCTAATGGCTGGAGGTGCCATATCATGGAAAAGTAGTAGACAATCCGTAATTGCTACGTCTACCATGGAGGCTGAGTTTGTGGCATGCTTTGAGG CCACAGTTCATGCTAAATGGCTACGGAACTTTATTTCAGGACTTGGGGTTGTCGACGGTATTGCCAAGCCGTTGAAAATTTATTGTGATAATTCCGCAGC AGTCTTCTTTTCTAAAAATGACAAGTATTCCAAAGGTGCTAAACATATGGAAGTGAAATACTTTGCCGTCAAAGAAGAAGTTCAGAAACTTAGAGTGTCA ATTGAGCATATTAGCACTAACTTTATGATTGCAGACCCTTTGACGAAAGGGTTACCGCCCAAAATATTTACTGGTCATGTTAAAAATATGGGCATTATGT ATGCGAATGAATACTGAACGTTATGTTATTAATAAGGTCTCAACTTTGACACTTAGAGCTCGTTAAATTTTAAGTTTCTGATAAATATTTTATTTTCATA CTCATGTACACATGTGAGAATGATAATATTGAAAATAAAATTGTCTTTTTTTAAATGACATTATTATGTAATTCCCATTAATGTGTCATGTTAGGAATAA GACTAATGTAGTAGTACATGAAAGGGACTATGTCGAATAAATGATGTCACATGAGACAAGTGGGAGAATGTAAGATTGCCTCTTGTGATATGAAGGGATA TGCTATTTCCTTGATTAAATGACATAACTCTTTGAATGAAGAGTTATGAATGAAATGATAAGACCATTGAGAAATAGCCTATATATAGTGCTTGATGGAA GCACTATACTCATCAGAAAAAGACTTGAAAACATAGTCCCTATCTCTGCCCAGAAAGGTTGCTCTATCTACCATCAATAAAGGAAGAGCATAGAAAAGGA AGGGAAAGAGATAGAAGAGTTTCTCTATAAACGAAGAACATCATACAACAGTAAATGGAGGATCGTGTCGCCATGGTTAAAATTTACAGGATGTGCCCAT GAAGAAGAAGATGGCATTGCTTTTGGACTAAAAATATTTAGTTCTGTGGTATTTCCATTTGTGGTCCGGTCCGCAGTTGAGCTCGACATCTTCAACATCT TAGCGAAAGCTAAGGTCGAAAATGTCAAGCTATCTGCGGAGGACATTGCTGCAAAGATTGGTAGCAAAAACCCTGAAGCACCAACAATGCTTGATCGTAT TCTGAGGCTGTTGACTAGTCACTCTATGCTCAATTGCTCCATTGTTGATGAAAATAATCAACAAGGGCCTCAAAGGCTATATAGTCTCACACCAGCCTCC AAATATTTTGCGACAGATTCTAATGGTGTGTCATTTGGAGCCATCTTGAACTTATTTTTGGACAAGGTCTACACTGAAAGCTG
• Tissue: flowers
• Gene name: LI_gene_85658;
• Additional information: details;

Expression of Ll_transcript_115820

FPKM

• FPAB: 3.6
• FPNAB: 2
• LF1: 0.3
• LF2: 0.1
• LF3: 0.3
• LF4: 0.1
• UF1: 0.1
• UF2: 0.2
• UF3: 0.2
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_115820

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 32.96% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.04% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020987654.1)
• Pfam: Integrase core domain (PF00665.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;