| Id Trinity | FTRINITY_DN59388_c3_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_115824 |
| Sequence | ATTGGCAATTGAGTGATCAGACTAGTGGGGGTTTATTAACTCCCTCCCTCTCACTTCATGGGTAGTTTCCGTGATAGTGGAGGAATTACAACGTCTGATA ACTCCTCCTAAGCTCTTCTATAAATTGAGGCACTCATGCATTGAAAAACCGTTCCATCTAATTCATTTTGCTGTCTCATAAAGAGAAACACAAAGTAAGG AAAGTTGAGTGCCATAGAGAGAAGGGAGGAAACTGAGTAGTTCCTATTCATCAAGGAACACATAAAGGGAAGGCAGAGAGGTGAGAACAAAGCAACCAAA AATGCAACAAGAAAAGCAATCAGAAAAGCTATTGGAACCAGCTTCATTCAATGCATTCGCCTTAGGCAACAGATGTGTCAAGTTCAATAGACTGAATTAT GCTGATTGGTCCGAACAGATCCAGTTCCAACTGGGTGTTTTGGAGTTGGAATTGGCCATCATTATAGATAATGAACCAACCATAACTGAGACCAGCTCGG AGGCAGACAAGACTCTTTATGAGGCTTGGGAGCGGTCTAACATGTTGAGTCTTAGCTTGATGAAAATTTCAATCTCTGACAATGTCAAGTCGTCTATGCC TAAGACGAATAATGCAAGGGAATTTATGAGAATGATCAAGGAGTACTCCCAATCAAACATTACTGATAAGTCTGTGGTAGGAAATCTCATGACAGAGCTG ACGACCAAGAAATTTGACTGGTCGCAGCCTATTCATGATCATGTAACAAGTATGGCAAATCTGACTGCCAAAATGAAAGGCATGGGGATGGAAGTGACAT AAGAATTCTTAGTATAGTTCATTATTAACTCCCTTCCTGTTGAGTTTGGCCAATTCCAGGTGAATTATAACACCATAAAGGAGAAATGGAATTTTCAAGA AGTAAAGGCCATGCTTGTTCAGGAGGAGGGGAGGTTAAAGAAAATTAAGAATGACTCTGTTCACTTGTCCATTCAGGAGCCAGGTAGCACCATCAAATTC AGACCAAGCAATAGGAATAAAGGAAAGGGGAAGGAAAAGATCCCATTAAAGAAGGGGAATCCATAAAGAAATGAAGTGCTTCTTCTGTAAGAAGAATGAG CACTATAAGAAGGACTGTCCTAAAAGGAAGAACTGGTTCGAAAAGAAAGGTAAACATTTTGTTTCCATTATAGATGAATCATTTCTTACTGAGGTTCCTA ATAATACTTGGTGGTTAGATTCTGGTGCAACAACTCATGTGTCACATATTGTGTAGAGATTCCTTTCAATTCGAACCCAGGAAACTGAGAAGTTTCTTTA CATGGGGAACATAATGAAGGCACAAGTTCATGGAATTGGAACATATAGATTGATCCTAGATATGGAAACTATGTAGATCTAGAAAAGTATCTTTATGTTT CTGAATGTTCTAGGAACTTGGTTTCTGTTGCTAGGCTGGATTGTATAGGTTTTAATTTTAAGATTGAGCATTCTGGTTTTAAATTGTATAAACATTCGTA CTATTATGGTTCTGGTACTTTAATGAATGATTTATATTGCTTCAATCTTGATTTTAATTTTAAGGAATCTTTATTTAATGTTGAACATGAAGTTGGTAGC AAGCTTAAAGATTTTGATAAGAATTCTGCTTACCTGTGACATCAAAGACTAGGCCATATATCCAAAGAAAGGATAATGAGGTTAACGAAAAGTGAGATTT TACCTCATTTGGATTTTGGCAATTGGGATGTTTGTTTAGATTGTATTAAAGGAAAACAAACTAAACACATATCAAAGAACCCAGCCACAAGAAGTAGCAA ACTTCTTGAATTGATACACACAGACATTTGTGGTGCTTTTGATGTTCCATCTTGGGGTGGTGAAAAGTATTTCATAACTTTTATAGACGATTACTCACGT TATTGTTACCTATATTTGTTGCACGAAAAATCTCAATCATTGGATGTCCTAAAGGTATTCATTGATGAGGTTGAAAGGCAACTTGAAAAGAAGGTTAAAG TTGTGAGGTCTGATAGAGGTGGTGAATATTATGGAAAATATAATGAGAATGGACAATGTCCAGGACCATTTGCAAAGTTTCTCGAAAGTCGAGGCATATG TGCTCAATACACTATGCCTTACACACCGCAACAAAATGGTGTGGCTGAAAGGCGAAATCGTACTCTAATGGAAATGGTTAGGTCAATGTTAAGTCATTGT AATGTACCTTTATTGTTGTGGATGTACGCATTAAGGACCACTGCGTATCTGCTAAATAGGGTTCCTAGTAAGGCAGTTCCTAAAACTCCCTATGAGTTAT GGACTGGTAGGAAACCCAGTTTGAGACATCTCCATGTTTGGGGTTGTCCAGCAGAAGTAAAGGTGTACAACCCACATGAAAAGAAACTTGATGCAAGAAC CATTAGTGGTTTCTTTATCGGCTATCCAGAAAAGTCAAAAGGGTACAGGTTTTATTGTCCTAACCATAGTACGAGAATAGTTGAGTCTGGAAATGCTAGG TTCATTGAGAATGGTCAAATCAGTGGGAGTGATAAATCACGAAAGGTGGATATTATAGAGACTTCTGATAAATCTTCTTCACCGAAGATGTCTCATGAGA TTGTTGTTCCTCTAGTTATATTACCGTCAAATAATATACAGAGACAACAAGATAATATCCAAAACCCACATGATGAACAGATAGTTAATGAACCAATTAA TGAAGTCGTTAGTGATCAAGTGATGGAAGAACCGCAAGAAATAGCATTAAGGAGGTCTGAAAGGCAAAGAAGACCAGCTATTTCTAACGATTATATTGTG TATTCACTTGAACATGAATGTGACTTAAGCATTGATAATGATCCAGTCTCGTTCATAGAAGCCATGGAAAGTGATAATTCTGAAAAGTGGCTCAATGCTA TAAAAGAAGAGTTGAAATCAATGGACGATAATAAAGTTTGGGTTCTAGCTGAGTTGCCTGAGGGTTCAAAATGAGTTGGTTGTAAATGGGTCTTTAAGAC CAAGCGTGACTCGAAAGGCAACATTGAAAGGTATAAGGCTAGACTTGTCGCCAAAGGTTTCACTCAAAAGGAGGGCATTGATTATAAAGAAACTTTCTCT CCGGTATCTAAGAAAGATTCTTTAAGAATTGCTATGGCTTTGGTGGCTCATTATGACTTAGAGCTTCATCAAATGGACGTAAAGACCGCTTTTCTGAACG GTGACTTAAACGAGAAAGTGTATATGAACCAACCCGAAGGGTTTGTGACCATAGGAAAGGAAAATCTAGTGTGTAAATTAAATAAGTCAATATATGGACT GAAACAAGCTTCCAGACAATGGTATATAAAGTTCAGTGATACCATTACGTCATATGGGTTTGTGGAAAACACTGTTGATCGGTGTATCTACATGAAAGTT AATGGGAGCAAGTTTATAATATTAGTCCTATATGTTGATGACATTCTGCTTGCTGCAAATGACAAAGGATTGTTACATGATGTAAAGAAATTTCTCTCTA ATAATTTTGAAATGAAGGATATGGGTGAGGCATCCTATGCGATAGGAATAGAAATATTTCGTGATAGATCACAAGGATGGTTGGGATTGTCTCAGAAAGG ATATATCAATAAGGTATTAGAGAGATTCAGAATGGAAAAGTGCTCTGCAGGGATAGTTCCAATCCAGAAAGGGGACAAATTTAGTGAAAAACAATGTCCA AGGAATGATTTGGAACATAAGGAAATGAAATCTATTCCCTATGCATCAGTGGTCGGGAGTTTAATGTATGCTCAGACATGCACTCGGCCGGATATCAGTT TTGCTGTTGGAATGTTAGGCCGATATCAAAGTAACCCCGGAATGGACCACTGGAAGGCTGCAAAGAAGGTTCTCAGATATTTGCAAGGCACTAAGGATCA CATGCTCACGTATAGAAGGACAGATCACCTAGAGGTGATTGGTTATTCGGATTCGGACTATGCAGCATGTGTGGACTCACGGAAATCTACATTTGGTTAT GTCTTCCTAATGGCTGGAGGTGCCATATCATGGAAAAGTAGTAGACAATCCGTAATTGCTACGTCTACCATGGAGGCTGAGTTTGTGGCATGCTTTGAGG CCACAGTTCATGCTAAATGGCTACGGAACTTTATTTCAGGACTTGGGGTTGTCGACGGTATTGCCAAGCCGTTGAAAATTTATTGTGATAATTCCGCAGC AGTCTTCTTTTCTAAAAATGACAAGTATTCCAAAGGTGCTAAACATATGGAAGTGAAATACTTTGCCGTCAAAGAAGAAGTTCAGAAACTTAGAGTGTCA ATTGAGCATATTAGCACTAACTTTATGATTGCAGACCCTTTGACGAAAGGGTTACCGCCCAAAATATTTACTGGTCATGTTAAAAATATGGGCATTATGT ATGCGAATGAATACTGAACGTTATGTTATTAATAAGGTCTCAACTTTGACACTTAGAGCTCGTTAAATTTTAAGTTTCTGATAAATATTTTATTTTCATA CTCATGTACACATGTGAGAATGATAATATTGAAAATAAAATTGTCTTTTTTTAAATGACATTATTATGTAATTCCCATTAATGTGTCATGTTAGGAATAA GACTAATGTAGTAGTACATGAAAGGGACTATGTCGAATAAATGATGTCACATGAGACAAGTGGGAGAATGTAAGATTGCCTCTTGTGATATGAAGGGATA TGCTATTTCCTTGATTAAATGACATAACTCTTTGAATGAAGAGTTATGAATGAAATGATAAGACCATTGAGAAATAGCCTATATATAGTGCTTGATGGAA GCACTATACTCATCAGAAAAAGACTTGAAAACATAGTCCCTATCTCTGCCCAGAAAGGTTGCTCTATCTACCATCAATAAAGGAAGAGCATAGAAAAGGA AGGGAAAGAGATAGAAGAGTTTCTCTATAAACGAAGAACATCATACAACAGTAAATGGAGGATCGTGTCGCCATGGTTAAAAGTTGGTAATCTATAACCT TGCTTATTAATGTGAAAGCTATAAATTCTTAAGATCCATTTATCATGGTTTCCATGATAAAGTTTACAGGATGTGCCCATGAAGAAGAAGATGGCATTGC TTTTGGACTAAAAATATTTAGTTCTGTGGTATTTCCATTTGTGGTCCGGTCCGCAGTTGAGCTCGACATCTTCAACATCTTAGCGAAAGCTAAGGTCGAA AATGTCAAGCTATCTGCGGAGGACATTGCTGCAAAGATTGGTAGCAAAAACCCTGAAGCACCAACAATGCTTGATCGTATTCTGAGGCTGTTGACTAGTC ACTCTATGCTCAATTGCTCCATTGTTGATGAAAATAATCAACAAGGGCCTCAAAGGCTATATAGTCTCACACCAGCCTCCAAATATTTTGCGACAGATTC TAATGGTGTGTCATTTGGAGCCATCTTGAACTTATTTTTGGACAAGGTCTACACTGAAAGCTGGTCAGTTTTATTGCATGGTTATTGTTATAGTACTTAT TAATCAGAAAAATTAAAATGGTGTTCAATTTGTTTTTTAGTTTTTATTTTATGTGCATTCACTAATAAAAAACTTTAATTTGTGTACCCCATCTGCATAA TTTAAAATTTTGTACAATTACAATTATTATTTATTTTTGTAGTATTAACAAATTTGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_85658; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_115824
| Blastp | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 32.96% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.04% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020987654.1) |
| Pfam | Integrase core domain (PF00665.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |