Ll_transcript_113013

• Id Trinity: FTRINITY_DN59389_c2_g3_i3
• Name Transcript: Ll_transcript_113013
• Sequence: TTTTTCGTTACTGTTCTATTGTATATTGTACCCTTGTGTTCTGGGAAAGAACATTGGCGCCGTCTGTGGCTTACTTGCAACCATGGTGACTACAAGAAAC AGAGCTCTATCTCCCAGCCAAGTCGACCCTGCCCTAAGTACCCTTCCACCACCCAGACAACCATCACACCAAGCCAGTAGAAGCCACCACACTGAACAAG AACCACCACCCCCATCCACCCATCAACTCCTTCAAATGCTGGAACGCCAAGAAAGGCTAATCCAGGAACAAGCTGAACTCATTAAGCAACTACAAAAACC AGAACTGAAAACCACTAACCCTCACGAGCGCCCCATCCAAGAGATCCACCGTGAGGAGTCAGCCGGAGAATCATACATCCCATCCTATCCCACCAACCAA TCTCCAAATGTCCCACACCATTATTGCGGTGCCCGACACCCCTTCACCTCCACTATCATGGCTTGCCCATTACCTTCGCACTTCACCCGCCCCACCAACA TCGACCAGTATGACGGAACAACAGACCCGCAGGACCACCTAGATTCTTTTGAGGCCTCTATGCTCTTCCATGGGGCCACCGATCCGATCATGTGTAGGGC TTTCCCGCTGACTCTAAAAAAGGTAGCCCTACAATGGTTCACACGGCTGACCCCGAACAGCATCAGCACCTGGGCGACCCTGGCTTCTTCTTTCAACACA AGGTTCACAGCCAGCAAGGAACAGCCCAGGTCGTCCTACACACTGTCCGGCATTCGCCAAGGCCCTCAAGAATCCATCAGGGCGTATTTGGATCGGTTTA ATACCGAGGCGATGAAAGTGCGCACTCTAAGCCCAGAAGTGGCCGTCCACGTCCTCGTTATGGGACTACAGGAAGGTCTTTTCCGTACGGAATTGGCCAA ATACACCGACCTCACAATGCAAGACCTCAGATCTAAAGCCCAGCAGTTCATTAATCTCGAAGAAACCCACCACATCCACAACCGTCCAGAACCCCAGCCA CATCACTCCTCTCGAGAAGCCAAAAGACCAAGACCACATGACCACCCACGTGACCTACCTCCCCAACCCAAAAAATCCAAATACTCCACATACACACCCT TGAACGCCAGCCGCTCAAGAATCCTGCAAGAGGTCCTGACAACCCACCTTGTCCAACTCCCTCGCCCACGCCCAGCCAAGCCAGGCCCCCAGGACAGATC CAAGTATTGTGAGTATCACAGCATGTTCGGTCATCTGACGAACGATTGCACTCAGCTTCGAGACACCATCGAAGATCTCATTCAGGAAGGACACCTACAG CGATTTATCGCAGGTTTAGAACAGCGCCGGCGATCACCACAACGTCGTCGGCCTGAATCTACAGGACGGAGGTCCCCTCCCCCAGCTCATCAACGGCGTC CTGTCGCCAGAGACTACCCCGACAGACGCCGCCAAGACAATCAAAGGCAGAGAAGTCCCGTCGATATCAACACAATCTCAGGAGGATTTGCTGCAGGGGG CACCACCAGGTCCGCTCAGAAAAGGTACGTCCGAGAGGTGATGCATGTTTCCGCCAGAAGCTCTCATCATGAACACCACAACACGTCTCCTCCCATCACC TTTGACGACCGTGATTATGAAGGCGTCGTCAGAGGACATGATGACCCTCTCGTCATCACAGCAAAGTTGAACAACAAAAAGGTCAGTCGCCTCTTTGTCG ATCAGGGCAGCTCGGCGGATATCATTTTTCAGGACCTGTTTGAAAAGATGGAACTCCGGGACCGAGATCTCCAACCATATGACGGACAGTTAGTAGGCTT CTCTGGACAAGGCATCACGCCTAGAGGCTACGTAGAGGTCTGGCTGACAATAGGCGACCACCCACTGAGCAGAACAATTCAGACCAGGTTCTTGGTCGTG CATTGCGAATCAGCCTACAACGCCATAATTGGGCGCCCAACTTTGAACAGATTAAGAGCCATCGTGTCCACACCTCACCTGTGTATGAAATTCCTGTCGA GCAGCCTTCAAGTCTGTACAGTCCGAGGAGATCAATACTCCGCCCGAAGCTGCTACCAGATGAGCCTCCGCCCCCATTTCAGCAAGCAACAGGCACCCCC CTCAAAAAAATCTAGGGGCGTGCACATGGTCGAGTTGGACGTCAGAGCAGATGAAGGAGAATTCCGGCCACAACCTGAAGGAGAGAAAATCACACTTCAA TTGGGACGCTCCCCCGGACAGGTAGTCTACCTCGGCCGCACCCTTCCAGCAGAGCAAAGGTTGAAGTTGGAAACCTCCTTAAGGGAAAATCGCGACCTAT TTGCCTGGTCGGCTGCCGATATGCCGGGCATAGATCCTTCAGTCATCTGCCACAAACTGACGACAAATCCGGGGGCAAGGCCGGTGGCACAACGCAGAAG GAAAATGGGGGCGGACAGGATAAAAGAGGTCGCCTCCAAAGTTGCTGAGTTGCTCGAGGCGGGTTTTATCAGAGAAATCACATACACCACCTGGCTTGCA AACGTGGTGATGGTAAAAAAACCCTCCGGGAAGTGGCGGATGTGTGTAGACTACACAGATCTCAACAAGGTATGTCCTAAAGATCCATATCCTCTTCCTA ATATTGACCATTTGGTGGATAATTCTTCAGGTTACCAATACCTCTCCTTCATGGACGCATACTCTGGCTACAATCAAATTCCGATGTACCCGCCAGACCA AGAAAAAACGGCGTTCATTACAGACCAAGCCGCATACTGCTACACGGTAATGCCTTTTGGGTTAAAAAATGCCGGGGCGACTTACCAGCGGATGATGAGC AAAGTATTTGACGGGCAGATTGGGGATCATATGGAGGTTTACATGGATGACATGATCGCCAAAAGCCTTCCCGGCGAAGATCATGTCTCCATCCTGGAAA GCATTTTCAAACAGCTGCGCAAATACAACATGAGACTCAACCCGGAGAAGTGTACATTTGGGGTGGAGGCCGGCAAGTTCCTTGGTTTCCTGCTAACTAG TCGGGGGATTGAAGCAAACCCGACGAAATGCCAGGCGATCATCAATATGAGGAGCCCCCACACAGTTAAAGAAGTGCAACAGCTGAATGGGCGCTTGGCG GCCCTATCCAGATTCCTACCTTCCGCCGCCAAACACTCCCTACCTCTGTTCCAGCTGTTGAGGAAGAGCAAAAAGTTTGAATGGTCCGCTGAATGTGAGG CGGCGTTCCAGACTTTTAAACAGTATTTGGCTGCCCCCCAATTCTCTCCAAGCCAGAACCCGATGAGGTTTTGTTTGTCTACCTAGCTGTATCCGATGAA GCGGTGGCCGCCGTACTGATAAAAGAAACGGCAGACGGGCAGAATCCTGTGTACTTCATAAGCAAAGCCTTACAAGGACCCGAGCTGAGGTACCAGAAGC TTGAAAAGGTGGCGTACGCCTTGTTAGTAGCTACCAGGAGATTGCGCCAATATTTCCAATCCCATGCAACGGTGGTCAGAACTAACCAACCCATCAGGCA AATTTTGCATAAGCCGGAGCTAGCAGGGCGAATGATAGCTTGGTCCGTCGAACTTTCACAGTTCGACATCCGCTTTGAGCCCAGAACCGCCATCAAGAGC CAGGTGTTGTCTGACTTTGTGGCTGAGATGACCGCCCCAGTACATTCTGAGCAGTTGTGGACGATTTATGTAGACGGTTCATCAAATCCAAAGGGAAGTG GGGCTGGAGTTCTGTTGGAAGATGGTCAAGGGGTCACCATTGAACACTCCCTCACGTTCACATTCCAAACCTCCAACAACCAGGCAGAGTATGAGGCCTG CATCGCCGGGCTGCAATTAGCAAAGGAGGTAGGGGCACAGAAAATTTTGATTTGTAGCGACTCTCAGCTGGCCGTTTCACAGATTACAGGTACATACCAG GTCAAAGACCCCCTTCTCGGGAAATACCTGATCAAAGTAAAAGAACTAATGGCCAATTTCGTTGAGGCGACCATTCAGCACGTGCCAAGAGAAAACAACA CCCGGGCGGACATCCTTTCCAAGCTCGCCAGCACCAAGAGCCTGGGAAATAACAGGTCAGTGGTCCAAGGAACGATTTATCAGCCCAGTGTCATGACAGT TGAACAAGTGGTGATCCCGGACAATTGGACAGGGCCTTTCATCCGGTACATCCTCCACGGCAGCCTACCAGCTGACCCGAAGGACAAGCAGAGGTTCCTT AGATGTTGTGCATGGTATACATTGATACAAGGAACCCTGTACAGGCGAGGATTCTCAACTCCCCTCCTCAAATGCCTTGG
• Tissue: flowers
• Gene name: LI_gene_85661;
• Additional information: details;

Expression of Ll_transcript_113013

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 0.4
• LF2: 0.6
• LF3: 0.8
• LF4: 0.2
• UF1: 0.1
• UF2: 0.6
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_113013

• Blastp: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 27.92% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon 297 from Sophophora with 31.64% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR109W-B)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420725.1)
• Pfam: Retrotransposon gag protein (PF03732.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;