Id Trinity | FTRINITY_DN59392_c2_g2_i5 |
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Name Transcript | Ll_transcript_113392 |
Sequence | AAGTTCACTCCTAATAGACCTTATAAGCCTACACTTTGGACTGAGGCTTGGAGTGGCTGGTTTACGGAATTCGGAGGTCCGATACACAAAAGACCTGTGC AGGATTTGGCATTCGCGGTTGCTCAATTTGTAACAAAAGGAGGATCCTTTATAAATTACTACATGTATCATGGAGGAACGAATTTCGGACGAACAGCCGG AGGCCCTTTCATTACGACTAGCTATGACTATGATGCTCCATTAGATGAGTATGGTTTGATTAGGCAACCGAAATATGGTCATCTACAGGAGCTTCACAGG GCTATCAAAATGTGCGAGCGAGCTTTGGTTTCAGCTGACCCAATTGTTACTTCGTTAGGAGAGTTCCAACAGGCCGATGTGTACTATTCGGAATCTGGAG ATTGTGCTGCATTTATCTCAAATCATGATTCGAATTCCTCTGTTAGAGTGTTATTCAATAATATGCATTATACCCTGCCTCCTTGGTCCATTAGCATCCT TCCCGATTGTAGAAATGTTGTCTTCAATACCGCAAAAGTCGGAGTGCAAACATCTCAGATGCAAATGCTGCCAACAAGTAATCAAATGTTCTTATGGGAG AGCGTTGACGAAGATATTACGTCTATGGATGACAGCGCAGTTACGGCTCCCGGTCTCTTGGAACAGATAAATGTGACGCGAGATACAAGTGATTATCTTT GGTATATAACTAGTGTCGATATAGGTTCATCGGAATCTTTTCTACGCGGAGGAGAAACCCCGACTCTCGTTGTTCAGTCTACAGGCCATGCTGTACATGT TTTCATCAATGGTCAACTTTCCGGTTCTGCATTTGGAACAAGGGAGTATAGGAGATTCAAATACTCGGACAAGGTAAACCTTCGTGCCGGAACAAACAGA ATAGCTCTTCTCAGTGTCGCTGTTGGACTTCCGAATGTCGGAGGACGTTACGAGACCTGGAGTACAGGAATCTTAGGTCCAGTTGAAATCCATGGACTTG ACCAGGGAAATTGGGACTTGTCCTGGCAGAAATGGACTTACCAGGTTGGGCTGAAAGGAGAGGCGATGAATCTTGTCTCTCCAAATGGAATCTCTTCCGT TCAGTGGATGCAGTCAGCAATAGTTATAAAAAGAAACCAGCCACTGACATGGCACAAGACTTATTTCGATGCTCCGGAAGGAGATGAACCGTTGGCATTG GATATGGAGGGTATGGGTAAAGGTCAAATATGGATTAATGGACAGAGTATTGGAAGATACTGGACAGCATTTGCTAATGGTAATTGCAATGGCTGTAACT ATGCCGGAGGATTCAGGCCTCCGAAGTGCCAATTCGGTTGCGGCCAACCAACCCAAAGATGGTAAGTGTTGTTCATATTGCAGCTTCTGCAACCACTATC GAAATTACGGTTTGCTAATGCAATTGCGCTTGCAATATTGCGGCTTTGGTAGTTTCTGAAATTGCATCACAATCATAATTGCAGCCACATTAGCTGTTCT TATATAGCTTCTGCAACCGCATCGCAACCGCATTAGCCACATTTTTCGAAAATTGTCAGTGTTACCGCGACTGCAATTTCAAATTAGATGCACGGCTCAC ACTAAGGCACATAAAGTATCTAACATTTCTGTTTCATTTGTGCGAAATATTTCAGGTACCATGTACCTCGATCTTGGTTGAAACCAACTCAAAATCTACT CGTAATTTTCGAGGAACTCGAAGGCAACCCTTCAAGAATTTCTCTTGTAAAGAGATCCGTGGGCAGTGTCTGCGCCGATGTGTCGGAGTATCATCCGAAT ATTAAGAATAGGCACATTGAGAGCTATGGAAATGCAGCAAAGTTCCATCCAGCAAAGGCTCACTTGCATTGTAGCCCGGGTCAGATCATTTCTTCCATTA AATTTGCAAGCTTTGGAACTCCTTTCGGAACTTGTGGGAATTATAAGCAAGGAGCATGCCATTCTCCTACTTCCTATGCCATTTTAGAGAAGAAGTGTAT AGGAAAAGCAAGTTGTGCAGTAATTGTAACAAACAGCATTTTTGGAGACCCATGTTCAAAGGTGTTCAAGTGGTTATCAGTTGAAGCTGTGTGCTCTGCC ACAAATTAAAGGTTTTGATCAGATAAAAAATAGAGTTTAAAATGTATACACTGACAGTGTAAAGATTTATACACATGCACCCCATCATCCACCATTCATT TGGATTACCTTTTCTGAAAAGTCAATAATAATTAAAAATCAATGGTGATGATGTGATGACAGTGTATAAAACTCATACGCTGTCAGTGTATAATCTT BLAST |
Tissue | flowers |
Gene name | LI_gene_85681; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_113392
Blastp | Beta-galactosidase 3 from Arabidopsis with 76.56% of identity |
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Blastx | Beta-galactosidase 3 from Arabidopsis with 76.87% of identity |
Eggnog | beta-galactosidase(COG1874) |
Kegg | Link to kegg annotations (AT4G36360) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446869.1) |
Pfam | Glycosyl hydrolases family 35 (PF01301.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |