| Id Trinity | FTRINITY_DN74699_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_41734 |
| Sequence | CAATATTTCTTCTCCTCAAATCCTTTCACCCTTCTAAGTTTTAATTTAGTATCTACCTCTTTCTCTCTTTAAAAATGAAGAGTATGAAGCTAAGTACCTT TATATTAATCACTGCCACTGTGTTTTCTATATGGTCTTCAAGCTTTGAAGGCTGCAGTGCAACACAAGCAATGCATTGGAGGAAACTCAAAGCTGTCCCT GCTACTTATAATGTTTTAGACTATGGTGCTAAAGGTGATGGACATGCAGATGACACAAAGGCTTTTGAATTGGCATGGGCAGATGCTTGCAAAATGGAGG CATCAACAATGATTGTCCCATCTGGTTCTATATTTTTGGTGAAGCCAATCTCTTTCTCAGGCCTTAATTGTGACCCAAACATTGTTTTTCAGTTGGATGG GAAAATCATTGCACCTACATATCCTGCTGCTTGGGGCTCAGGTACCTTGCAGTGGCTTGAATTCACAAAGCTTAATAAGATTACAATTAAGGGTAAAGGT GTTATTGATGGTCAAGGCTCTGTATGGTGGAATGACTCGCCCACTAACAATCCCACATCTGAATCAACCAATACCACATCTCAATTTTCTATACAAGCAA ACAGTGGGAAATTGCCAAGCACCAAACCAACAGCACTGAGGTTCTATGGAAGTAATGGTGTAACAGTGACAGACATAACTATTAAGAACAGCCAGCAAAC CCATCTGAAGTTTGATTCATGTACAAATGTTCATGTGTCTAATATAAATGTTTCATCACCTGGTGATAGCCCTAACACAGATGGTATTCATCTCCAGAAC TCCCAAGATGTGGGAATCTACAGCAGTACACTTGCTTGTGGTGATGACTGTGTGTCAATACAAAGTGGATGCTCCAACATATATGTAGACAATGTGAATT GTGGACCTGGTCATGGAATGAGTATTGGAAGTCTAGGAAGGGAGAACACCAAAGCCTGTGTTACAAATGTCACTATCAGAGATATTACTCTCCATGATAC CTTAACTGGTGTCAGAATAAAGACACATCAGGGAGGCTCAGGCTCAGTCCAAGATGTGATGTTCTCAAACATTCAAGTTTCTAGGGTTGAAACTCCAATC ATAATTGACCAATACTATTGTGACAAGGGAAAGTGCCAGAATTATACATCAGCTGTTGCAGTGTCAAACATACACTATATAAATGTAAAAGGAACATACA CCAAGGAGCCTGTTTATTTTGCTTGTAGTGACAACTTACCTTGTACTGGCATAACCCTTGATACCATACAGCTACAATCATCAAGTTCAGAAGTTGTTCC TTTCTGTTGGGAAGCATATGGAGAGTTAAAAACAAAAACAGTGCCTCCTGTTGATTGTTTAGAAAAGGGTAACCCATCAAGCATTGGAATCCAATCCAAT AAAAATTCTTGCTAAATGTATCACCATGGTATTAAGGATGTATAAATTATGCATATAAAAGTGTTACGTTGATATCCAAATTTGGTCAAGTTCATGTATT GTTAGGGATAAGTTTTATATTTGCTGCTATGTACGTAGATTGAAATATTTGTCATAAGGAGATAATACGTTATTAGTCATATGATATTGTTATCATTATT TTCAAGTCTTTTATTAGCCAAAACTTAGATCTACTTCTATATGTATATTGTTATGCAATAAATAAGAATGATATGTAAGATGAAAATGTTCACGAGTCTA ACTCTGCATCTTGTATATTTGGTACAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_101465; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_41734
| Blastp | Polygalacturonase At1g48100 from Arabidopsis with 44.97% of identity |
|---|---|
| Blastx | Polygalacturonase At1g48100 from Arabidopsis with 44.7% of identity |
| Eggnog | Glycoside hydrolase family 28(COG5434) |
| Kegg | Link to kegg annotations (AT1G48100) |
| CantataDB | Link to cantataDB annotations (CNT0002960) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427342.1) |
| Pfam | Pectate lyase superfamily protein (PF12708.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |