| Id Trinity | TRINITY_DN12149_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_523206 |
| Sequence | CCGAGTCCTACTAATCTGAATCCATCCGAGTATCACATTTAACTAGCTCTACTAGAGAGGATGCTAACCCTTCAAGCCATTGGCTTTTGTTATTCTTGGT TCTTTTTGTACATAATTAAAGAACTTACTCAAAACCGGGCTTTACATTGGCCTGAAGAACATTCACAGAACTGGTTCAACCATGGTGGAGACTTGTTTAA CAGAAGATATGCCAACAAAGAACACAAGATAAACCCAAAATCAGTTTCAAACCTACGTTTGAAGTGGAAATTCTATGCAGGAAAAGAAATAACTGAAACA CCAGCAATATTCAATGGTACAATTTATTTTACAAGCTGGAATGGTAACATATATGCTGTGAAAGCATTAGATGGATCTCTAGTGTGGGAAAAGAACATTG AGAAGTTAACAGGAATAAGATATAATGGTTTTATTTCTAATGTTAATTCCACATTCTCAAGAGCAACACCAACTTTAGCTGGTGAAGATTTACTTGTTGT TGGAATATATGGTCCTGCTGTGGTTATTTCTCTTAACAGGAACAATGGTGAGCTTGTGTGGATGACCCAACTGGATAATAATGCTAGAAGTGTTATCACC ATGTCTGGAACATATTACGAAGGGGCTTTCTACGTTGGAACTTCTTCAACAGAAGAAGTGTTAAGTGTAGAACAATGCTGCACATTTCGTGGCAGCTTCT CCAAATTGGACATAAAATCTGGTGCTATATTATGGCAAACTTATATGATACCACATAATCATGGCAACAAAGGAGAATATGCTGGTGCTGCTATATGGGG AAGTAGCCCCTCAGTTGATCCATTAAGAAACTTGATATATATTGCCACTGGTAACTTATACTCAGTTCCATTAAGAATAAGTCAATGCCAAAAAGAAGAA AACAATCAAACAATACCTACCCATGAAGATGTGTGTGTTGAGCCTGATAACCATTCTGAATCAATCCTAGCACTTGATTTGGATTCTGGGAAAATCAAAT GGTACCACCAACTTGGAGGTTATGATGTTTGGTTTCTTGCATGCAATAATCTTTCAACACCTAATTGTCCTCCAGGTCCAAACCCTGATGCTGATTTTGG GGAGGCACCAATGATGCTTACTATTCATGTAAATGGTTCCAAGCAAGATATTGTTGTTGCTGTCCAGAAAAGTGGTTTTGCATGGGCTTTAAATCGGGAC AATGGTGCCCTCATCTGGTCTACGGAAGCAGGACCTGGTGCTGTAGGAGGAGGAGGAATATGGGGAGCAGCAACTGATGCAAAAAATGTCTACACTAACA TTGTTAATGCTGATGCTAAAAATTTCACACTTGTACCATCTCAAAGGGTCACTACTAGTGGGGGCTGGGTAGCAATGGATGCAAGGAATGGTAAAATTCT TTGGTCCATAGAAAACCCTAACAATGCAACTTCTGTAAGTGGCCCAGTGAGTGTAGCAAATGGTGTTGTGTTTGTTGGATCCACAAATGCAAAGGGATCA ATATATGCTTTAAACGCACATAGTGGACAAGTTCTATGGTCTTTTGTCTCTGATGCTGCTATCTCTGGTGGTGTTTCAATTAGCAATGGTTGCGTTTATG TGGGTCAAGGACGTAGCCTTTATACTTCACCTGTTGGGTACAACATTACTGCAGCAACTTCACTCTTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_119674; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_523206
| Blastp | Polyvinylalcohol dehydrogenase from Pseudomonas with 28.74% of identity |
|---|---|
| Blastx | Polyvinylalcohol dehydrogenase from Pseudomonas with 28.74% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454909.1) |
| Pfam | PQQ-like domain (PF13570.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |