Ll_transcript_395192

• Id Trinity: TRINITY_DN13905_c0_g1_i1
• Name Transcript: Ll_transcript_395192
• Sequence: GTTATCCCTATCTATCTTGACTCGTTCCCTCAGCACCCCTACAAAAAAAAAGTATCCACCTATGAAATTGGATGTCCCAAAATTCATCCCTTTGCCACTG TAATCTACTCCATCGAAGTGTCAATTGAATTATGGATCCTGTCAGTAAAGAAATTTAGTCTGCTAGTGTTATTCCTCTAACTAACATTCCGTGTCTTCAT TTCAATACGAAACATGCTTAACAAAATCCGACCAACCTGGACAAGTTCCCATGAAAACAACCTACGTTTACTGCAAACCCTGTTCAACGTTCCCAATCTC CAAAATCCATTGAACCCAAATTCTGAAACTCTAACAACACATTCTCACTCCCATTTCCTCATAACAAAAACAACTCGGTTCCTTCATTCCCATTCACACT CTGATATACCACCACCTCTTTTTCTTCAAAACTTGCTCAAATTCCGAAGAGACAAGCCCGTTGATCAGGTTGAGCGAGTTCTCGACCTCTGCAGCTTCGA CCTGAATGACGATCTTGTCCTCGCCCTTCTCCGCCGGCACCGGACTGATTGGAAGCCCGCTTATGTGTTCTTTAACTGGGTATCTAGAGTGGGTCCCACA CGGAATGGGTATACACCCAGTTCGGTTGTTTATAACGAGATTATTGATATTCTTGGGAAAATGAAGCGTTTTGAGGAGGTAGACCAAGTGTTCGATGAAA TGGCGAAGAGAGAGGGACTCGTCAACGAAGCTGTATTTGACACTTTGCTGCGTAGGTATGCGGGTGCGCATAAGGTTGATGAAGCAATTTGGTTGTTTTA CAGGAGGAAAGAGTTTGGGTTGGAGGTTGATTTGGAAGGGTTTAGAACGCTGTTGATGTGGCTGTGTAGGTATAAGCATGTGGAAGATGCAGAGACTTTG TTTCATAATAAGGCGAATGAGTTGAAGCTTGACCATGATATAAAGACATGGAATGTGATTCTCAACGGTTGGTGTGTTATTGGGAATGTGCATGAGGCAA AGAGGGTTTGGAAAGACATAGTGGAATCGAGATGCAAGCGTGATCTTTTTACCTATGGAATTTTCATCAAGGCATTGACTAATAAGGGGAAGTTAGGCAC TGCACTAAGGTTGTTTCGTGGCATGTGGGATGGAGGTTGCAAGCCGGATATTGTAATATGCAACTGCATCATTGATGCTCTTTGTTTCAAGAAGAGGATT CCTGAAGCTTTGGAAGTTTTCCAAGAAATGAATGAGCGAGGTTGTCAACCAAATGTGGCTACTTACAATTCGCTGATCAAGTACATGTGTAAGATTCAAA GAATGAAGAAGGTCTATGAACTTGTAAACGAAATGGAATTAAAAAGGGGGAGTTGTTTGCCTAATACTATTACTTATAGTTATTTGCTTGGGTCCTTGAA GGAGCCAGGAGAAGTTCCTGGGGTTTTGGCGAGGATGGAGAGAAATGGATGCAGCATGAATGATGATGTTTACAACTTGGTTTTGAGGTTGTACATGGAA TGGGATGATCAGGATGGAGTAAGGAAAACATGGGAAGAAATGGAAAGGAACGGATGTGGACCAGACCGACGATCATATACGATCATGGTTCATGGGCACT ATGAAAAAGGTAGAATAAAGGATGCTTCACGCTATTTCAGGATGATGATATCAAAGGGAATTACTCCAGAGCCTAAGACTGAGAAACTAGCAAATTCAAT GAACATCCAGTTAAAGGAGAGAACAGGAAAAGAAGGAATCGAAGGGGAGACAACTAGCATTTGAGGCCTTTGAAATTTGGATATCAGTCCAAGTGGAAGA TAGTTAGGCAATGTTTCCTATAAGTCACTGGCTCAGCTTGGCAACTTGAGTTTTATTTTAACTATGTGTGATTAATTTGGAAATTTGTAGATTTTGGATG AGATTTATAGATTATGAGACTTAAGAATAAAAAGAAGTCATGTTTTCAAAAACGGCAACCTCTAATGTATAACATTTTTGTGTTAATATGATCTTAATGT TAAGGGAGGGGAAAAAAAGCATAATAAGCATGAACAGGAGCATAACCACTGTGCTTTTTCTTTATCAGCAGGATCTTCAATTCCATATGGACTTGTTTAT AATGTAGCATAGTTTTGTCCTGTAGATGTGTTCTGTTTCATAATGTATTTTTTTGGTGGAATTGAATATTATGGAAGTCAGCCATCAGTTTGAAGTGCAT TTTAGCGATCACAATGACAAATCAAGGTATGTCATGCACTTATACATGGTAAACCAGATATGTTGAATTGAAATAGGTAAGAAGCATCAGTGATTTACCC ACTGTTACTTGTATTTCTACTTCATGTATTGTGTTTTTCCACTGGTTTATATGGCATAATTCTTCTTGTACACTCTGC
• Tissue: pods
• Gene name: LI_gene_120262;
• Additional information: details;

Expression of Ll_transcript_395192

FPKM

• PAB: 0.6
• PNAB: 3.8
• PS1: 3.9
• PS2: 1.8
• PS3: 2.9
• PW1: 3.1
• PW2: 3.5
• PW3: 2.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_395192

• Blastp: Putative pentatricopeptide repeat-containing protein At3g15200 from Arabidopsis with 51.79% of identity
• Blastx: Putative pentatricopeptide repeat-containing protein At3g15200 from Arabidopsis with 54.41% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G15200)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431333.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;