Ll_transcript_496145

Id TrinityTRINITY_DN16097_c0_g1_i1
Name TranscriptLl_transcript_496145
SequenceAATATATGAAATTGCAATAAAGGGTTCAGATGAAGAAAAGATATATGCTGCTACCATTCTTTGTGGGTCATCTCTAGTACGTGGATGGAATGTACAGGAG CACACCGTGCTTTTTATCATAAAACTGCTCTCGCCTACAGTTCCTCCAAATTACTCTGGGACTGAAAGCCATCTAATCAGCCAAGCTCCACTTTTGAATG TTCTTCTAGTTGGAATTTCGTCTTCAGACTGTATTCATATTTTCTCTCTACATGGTTTGGTTCCATTACTTGCAGGAGGGCTAATGCTACTATGTGAGGT TTTTGGATCATGTGCTTCTGATGCTTCACAGACTCTTGCAACTGGGGAAGAAC BLAST
Tissuepods
Gene nameLI_gene_121031; 
Additional informationdetails; 

Expression of Ll_transcript_496145

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_496145

BlastpMediator of RNA polymerase II transcription subunit 33B from Arabidopsis with 62.07% of identity
BlastxMediator of RNA polymerase II transcription subunit 33B from Arabidopsis with 62.07% of identity
EggnogComponent of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Involved in the repression of phenylpropanoid biosynthesis. May compete with MED33B for common binding partners or for occupancy in Mediator(ENOG410XPER)
KeggLink to kegg annotations (AT2G48110)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019426144.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;