Ll_transcript_317612

• Id Trinity: TRINITY_DN18529_c0_g1_i1
• Name Transcript: Ll_transcript_317612
• Sequence: GCAAAATTTCATGTACACAAAGAAAAATGTTAGGGGAAGATGAGGTTCATCTCAATAATTAGTGAAGTTTTGAGAGATGAGTTTGAAAAAAAGCATAAAG CAATAGATGTTGATACTCTATGTAATGATCAGAGAAGCACATGCAAATCCAACATTACCACAATTCTTTTCTCCACCCTCTTCCACTTTTTCCTGTTACC TTTATTTTTTAAGTTTTTTTTCTTCCTCAATAACCCCACAGGCCACACCCTTGTGGTCCAACCTACCCTTATCAGTTATCACATTCAAGCCTCTATCTGT TTCACATATTTGATCACATCAACCTTAACATCTAACTTTAACCTCACTTTTTTCCTTCACTCAAACCAAATTGAAAGGATCTCTTACACTTCCCACTACA TAGATTCCTAGACAACTTGATCAATTAAGTGACCAACTAACCTCCTAACTCTCTTTCACATCATCTCACTAGAAATTAAGGTAGACCCAAACCAAAAGTT TAGCCACACCTTCCTTTCTCTATATGTATGTTCTATCTTATGAGCTGTACCTGCCAACTCCAACATACCTTGTGTTAAAATTATAGAATTTTGTTACCTT AGGTTATATATATAGAACACAATATTATATATATAACATACCATAATGCCATCTGTTCATTCTAGTCCATGCATCCCGATGGAAAATCCGGCAATAGCAT CACTACTTCGCCACACACCGGGCGAAAAGCGAAGCAAATTCTCTACTGGTGGCCTATTAAAGATGTTCAAACTATTTCCTATGTTAACCTCGGGCTGCAA AATGGTGGCGCTATTAGGAAGACCGCGCAAGCCTATGCTCAAGGACAGTGCCACAAGCGGAACAATCTTTGGTTACCGCAAAGGGAGGGTGAGTTTGGCA ATACAAGAGGATACGCGCCAAACGCCAATCTTTCTTATAGAGCTGCCAATGCTTACAAGTGCTTTAAACAAAGAAATGGCCTCGGATATAGTTAGAATCG CGCTGGAGAGCGAGACGAAAACCAATAAGAAGAAGTTGATGGAAGAGTTTGTGTGGGCAGTGTACTGCAATGGAAGAAAAGTTGGGTATTCAATAAGGAG GAAGCAGATGGGAGATGATGAGTTACATGTTATGCAGCATTTAAGAGGTGTGTCTATGGGAGCAGGGGTACTTCCAACCGCATCGGATCATAAGGAAAGT GCAGATGGAGAAATGACTTATATGAGAGCAAGATTTGAAAGAGTGGTTGGTTCTAAGGATTCAGAAGCTTTGTATATGATAAATCCAGATGGTGCTCAAG GCCCAGAATTTAGTATCTTCTTTGTTAGAGCTAACTAGAATCAATATTCAATATATTATATGTCTATGTATGTATGTAAGTACCCTTAGCTAGCTTTGCT TATATTGTATTAGTAACGTATTCTTAAGCTTTTTTAATAGGGCCATTAAATGAATCAATCACATGGTCATTTTCTCAATTCTCGTTAATAGTGTTTTGTT TCAGTTCATGTTGTTTCTATTTGTGTGACCATTTTTGTCTTTAAAGTGTCTTTCTGAGTTTCACTATATAACATTAATGCCTTTGTCTGCAAATTGAAAC TGCAGGAAGTTCAGTTGCATCACTTGCTCTTTTTTTCAACTGATTTATATGTTATAGTTTAT
• Tissue: pods
• Gene name: LI_gene_121845;
• Additional information: details;

Expression of Ll_transcript_317612

FPKM

• PAB: 9
• PNAB: 13.3
• PS1: 12.5
• PS2: 2.3
• PS3: 7.6
• PW1: 14.1
• PW2: 28.8
• PW3: 8.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317612

• Blastp: Protein MIZU-KUSSEI 1 from Arabidopsis with 44.31% of identity
• Blastx: Protein MIZU-KUSSEI 1 from Arabidopsis with 44.31% of identity
• Eggnog: DUF617 domain containing protein(ENOG4111IZ9)
• Kegg: Link to kegg annotations (AT2G41660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416750.1)
• Pfam: Protein of unknown function, DUF617 (PF04759.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;