Ll_transcript_317644

• Id Trinity: TRINITY_DN20012_c0_g1_i1
• Name Transcript: Ll_transcript_317644
• Sequence: AACTTTACTCAAACCCAAAGTCAAACACAGTTTTGGTTTCACAAACATGTACAACATTCCCAAACTCAACCTCACTTTCCTTTTCCTATGCCTCTTCAAC ACAACCCCAACATCACTTCTAGTATTAGCAAACATAGAAACATGTTTGGATAGTGTTTGTCATATGAAGGAACCAACAATCAAATTCCCATTCCAAATAA AAGAGAAACAACCAAAGACATGTGGATACCCAGGGTTTAGAGTATCATGCAGTGAGAAAGGTCAAATACTTCTTAAACTACCTAACTCAGGAGAATTTAT CATCAAAGCTATAAACTATGTTACACAACAAGTATGGTTGAATGATCCCAATAATTGTCTCCCAAAACGAATTCTTTCACTTAATCTCTCTGGTTCCCCA TTTGATGCTGTTTACTACCAACAATTTACCTTCTTTAATTGTTCCTTCAACTTGGAGTATCTCTCATATAGGTACAATCACATATCTTGTCTAAGTGATT CTAATAGGTACCATGTAATTGCCACATCCTCATCAAATGTGGTTACATATTTAGCGTCTGTTTGTGAGTTAGTTAAAAAGGTTAATGTGCCTGTCCAATT GCCGATTTATGATCATGTTCTATCAACTGATCTTACCGATGATCTGCGGCTGTCGTGGGAGTTGCCGCCGTGTGGGAGGTGTGAGTCGCACGGTGGCCGA TGTGGCTTCAACTTTAACACCACCAACTCCTCCACTATTGAAATTGGCTGTTCCAATTTTCCTTCAAAAGGTATTTCTGAGAGGGTTAGTTACATAATGG CGTTATGCATATTAGTACCTGCATTGTTATGCTTAGTTGCAATATTTACTTGGATCTGCAACAGATTTAAACTTGTGGCCCAAGGTTGGGCTTGGAGAAT TGAAAGAGTAGCAGATTTTGAACCCCTTATTAGCCCACAACTACCCACCACCATTTTGGGCCTTGATAGGCCAACAATTGAGTCATACCCAAAAATAGTT CTAGATGAAAACCAACTCTTGCTAAAGCCCAATGATGAGGCTTGCCCAATATGTTTGTCTGAGTATAGGCCCAAAGAAACAGTGAAACACATACCTGAAT GTAGACATTGCTTTCATGCACAATGCATAGATGAATGGCTTCCATTGAATGCTTCTTGCCCAATTTGTCGAACTTCTCCACAGATGTTACCACAGTCAAT TGATCCATCATGACCATACTATACTATATTAGTGCTAGTGATTTTTATCTCCCT
• Tissue: pods
• Gene name: LI_gene_122330;
• Additional information: details;

Expression of Ll_transcript_317644

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.2
• PS2: 0
• PS3: 0.1
• PW1: 0.9
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_317644

• Blastp: Putative RING-H2 finger protein ATL21A from Arabidopsis with 37.95% of identity
• Blastx: Putative RING-H2 finger protein ATL21A from Arabidopsis with 36.84% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT2G46495)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435251.1)
• Pfam: Wall-associated receptor kinase galacturonan-binding (PF13947.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;