Ll_transcript_523538

• Id Trinity: TRINITY_DN22410_c1_g1_i1
• Name Transcript: Ll_transcript_523538
• Sequence: GTCATAATTTCAGTAGCAGAAGGAGATAACTTATCTTCTTATACTATGAAATATTTATTCTCTAATATTAAACTCTTAATTAACCTCTTCCTGTTCAAGT GAGAAAAAGAAAATAAAAAAGATTTATAACTATCTATAACTCACTATAAGTAGTTTTACCAAAGGAAAAGAAAATAAAAAAAAGGATTTATAAGTATAAC TCTATAAGTGGTCCTAAACAAAGGAAAATCACAAAAAAAAAAGATATAAGGGAAAAAATAAAGACAAGAAAAGACACGAAGGGGTAGATTATTATATTTT ACTATTTTCACTAGCCTGAAAATAAGTTTAAGAAAAAAAAAATATGGATGAATTGGAATATCGGTCAAAAGAATCCACCACTGCCACTGTTTTGCCGCCT ATTACTCACTCCCACACCGCTCCAACCGATGCCACACGCCGACCTCTCACTTAACTTTACAAAGCGCCACGTCATCACATTCAACCGCGTCACCGCCATT CCAACTCACCGATTCTCATCTTCCCCACCTCGCTCCGCGTCCAAGTCGCCACCGAAGCTGCTACAACCACCACAACCCAAAGGCGGCGACACGCTTTCTC TCCGTTCCCTGCTAAGCAACGACAGCACCCGAGTCATCGGTGACCTAAACGACGACGTAGAAGGCGAGTCACAAACCAAACCCGGTTCATCACTCGAAGG AATCTCAATCATCACATCCACTGTTAACGAAGGTTTCGCTCTCACTAACGAACAAACTTCAGAACCGGTTCGGTTTTCACCCGAACCTGATTCCGGTTCA CAAATATCAACAACAACAACATCACGTTCATGATTATCTTTACCTCCTTCTTGTGTGGGTTCCACCGCGGCACGGCAAAGAGGACACGTGGCATGAGAGT GAAACCACATATCAATACAATCAATATGAAACGCGTGATTGCATTTCGGTAAAACCCGACCCGTTTCACCTTCTTCAAACTCAGACAAACAAATCGCGCA ATCTGGCGTGTTATCTGGATACGTTTTTGCGTCATAGTTGAAAATCGGTAGCAACGCGATGATGGACGCGTCGAGGCCACGCGCGGTAGGATTGTTATTG GAATCGAGGTGGAAGACGAGGTGGTTGCTGCTACGGTTGCGGAGGAAACGACGGCGAGTGCGGAGGAGGTACCAGCGAGCGTAGAGATGGAGGAGGAGCA TTAAGATAACGACGAAGAAGAGGATGATGATGGAAGAAAGCATGATCTTACCGCGAACACTGTAAGATTTTGGATTCAGAAATTCATTGAGTTTGTGTGT GGATTCAGCGGTGTCCATTTTTGTGAGTGGGAGTGAGAATGAAGGGAAATGGAAATGATGGTTTTATGAGTTTCTCTTTCTCTGTTCAATTATTGTTGTT AATGGAGACGCCACTGTTGACGCGTTTATCACCTTCTTCTCACTTAGATTCGTTTTGTTCTAAACCAAGTGAAATTATTTTAGTTTTTAAGTTAGACTCT TGCTTTTTATGTGCTCTGCCCTAAACAAATTAAATATGAATCTAAACTTTTTTAAGAGTAAAGCTACTTTATCCTGCAAAAACTTTCTTAGGTTCAGAAG TAACTCA
• Tissue: pods
• Gene name: LI_gene_123032;
• Additional information: details;

Expression of Ll_transcript_523538

FPKM

• PAB: 1.7
• PNAB: 0.6
• PS1: 2.8
• PS2: 0.5
• PS3: 0.7
• PW1: 1.5
• PW2: 2.4
• PW3: 3.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523538

• Blastp: RING-H2 finger protein ATL2 from Arabidopsis with 47.4% of identity
• Blastx: RING-H2 finger protein ATL2 from Arabidopsis with 42.4% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT3G16720)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439608.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;