| Id Trinity | TRINITY_DN22559_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_523684 |
| Sequence | ATGAGTTAACGGACATTTCCTCTCTGTTGTGCTTGTAAAAACTAGCAGAACCTTTTCATTGGCCAAGGATGACTACTTCAACTTCGAAAGCCACTTGGAC ACCTGAATTCCATAAAATATTTGTTGATTTATGTGTAGAAGAAACATTGAAGGGGAATAAGCCCGGGACACATTTTACAAAGGAGGGTTGGGCGAATCTT CTTGAATCCTTTTATGCAAAGACTGGTGTGAGATATGACAAGATACAAGTTAAGAATCATTATGATTTGACCAGAAAACAATGGAAAATCTGGGTCAAGT TGATTGGTGATTGTACCATGAAATGGGACCCAGAAACCAATAAGTTTGGTGCTTCTGTAGAAGACTGGCACAATTATATAAAGGAAAACCCAGAAGCTGC ACAATTTCAGTTTAAAGAAATCCAGTTTAAAGACAAATTGGATGTCATCTATGATGGAGAAGTGCAAACTGGGGAATCGAAAACTATAATTAGGCTTAAG AGGCAGAATCATACTTCAGCAACATCTCCTTTGTATGGAAAAGAGCAAGAGAAGAAACGTAAGAGTGTTGGTAGGGATTGTGGATTAAATAATTCCGTTG TAGTTAATGCTATACCAATCAATATGATTTCAAGTGAGCAAAGCTTCTCCAGTTCACCACCTCCTATTGTCAAAGCCAAGTGGACCCCTCCAGTTCACAA GATCTTCCTTGATATATGTCTGCAAGAGACGTTAAAGGGGAATAAGCCTGGGAATCATTTTACAAAGGAAGGTTGGAAGAATATTATTGACTCCTTTTAT TCAAAAACTGGTTTGAATTATGATAGATTACAGCTTAAGAATCACTGGGATCTTATCAAGGGACAGTGGAAAATTTGGTGTAAGCTTCTTGGCACCAGTT ATATGAAATGGGATCCATCAAGCCAGAAATTTGAGGCTAGTGAAGAAGATTGGACCAAATATTTACAGTCAAACCCAGATGCTGCACAATTTCGCCTTAA GGAACTGCAATTCACTGACATATTGGAAACCATCTTTAATGGAACTTCAACTACTGTTACAGAGGAGATTGAACCTGCTGTGCACCAAAGGAAAAGTGAT GATAGCGAAGTTACATTCCCTTTGCATAAAGTAGAAGCAAACACAGCTAAATTAGATGAGAAAACCAACTATCCTTCTGATGCTACAGCGTCAAGAAATG TTGTGAATATTCGAAAGAGTGCTACTGCAATTTCATCTACTGAAGGCAAACGTAACTATACTATCGGTGAATGCATTGAGTGCCTTGATAGCATGGAAGA AATAGAGCAAGGAAGTGACCTCTACTTGTTTGCTTTAGATGTATTCCTGAAGCAGGAATATCGGGAAATTTTTCTGCAATTGAAAAAGCCTAATCTGAGG GTCTCATGGTTGCTGCGGCTTCAGTCTGCTGGTGCACCTTTATTCTAGGTTTTGTCATTCCTCATCTTTATCTTACATTTCATATAATTTGGTGTTTATG TAGTCGTCCGTTCCTTGTATGATAATATAAAATTGAGAGGGCTATATTGCAAACATGACAATGTTGCCTGGAACCTTCAAAGTTTATGTTAGTAGCTCCT TAATGTAACAGCTGATAAATGGTAGTGAAGCCTCTTTTCCGTTGTTTTACAAATCTCTGGCATATTTTGTTGCCAGTATTTGTACGGTTTTAAATTAGTC AGATAGAATACCTGTGTTAACAACCAGACCATTTCAAAATCAATTTATGTAGACTTGTTATTTAAACAATCTCCATGTCAACTGTTTTCTTGTACTAAGA AACTGTTAAGAAAAGTGGTCAAACTAAAGTTTTTAACACTCAACAGAGGAATGTTTGATTCCAAAAACAAGTATTTGAGTTCGTGAGCCTTTGAAGTTTG AAGTCCCATTATGAAATACCCCAAGCTGCAGGATCTTGTTCTTAAGCTCAAAACAAACTGGTTTCCAGTATCTTTGCTCTCCATCTGCTGCCCAATCTGG TCACAAATAGGGTCAGGAAGCAAAAATACATGCATTCCTGTATCTCGAAAGGTCCATGCTCCATATCGCCGCTTATGATACTTCATTCAGATGCCCTTCT TTTGTATTGCATTCCTCTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_123078; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_523684
| Blastp | L10-interacting MYB domain-containing protein from Arabidopsis with 42.98% of identity |
|---|---|
| Blastx | L10-interacting MYB domain-containing protein from Arabidopsis with 42.65% of identity |
| Eggnog | NA(ENOG410YZWQ) |
| Kegg | Link to kegg annotations (AT5G05800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430599.1) |
| Pfam | Myb/SANT-like DNA-binding domain (PF12776.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |