Ll_transcript_523685

• Id Trinity: TRINITY_DN22559_c0_g1_i2
• Name Transcript: Ll_transcript_523685
• Sequence: TATAGAAAAAGAGGGTTTCAGAATCTGATTTTCCGAAGCTATCAGAATACAATAATCCAGGGTTGTTTCAAATGCACCATTTTCCTTGAAAGAATCTCAG AACCTTTTCATTGGCCAAGGATGACTACTTCAACTTCGAAAGCCACTTGGACACCTGAATTCCATAAAATATTTGTTGATTTATGTGTAGAAGAAACATT GAAGGGGAATAAGCCCGGGACACATTTTACAAAGGAGGGTTGGGCGAATCTTCTTGAATCCTTTTATGCAAAGACTGGTGTGAGATATGACAAGATACAA GTTAAGAATCATTATGATTTGACCAGAAAACAATGGAAAATCTGGGTCAAGTTGATTGGTGATTGTACCATGAAATGGGACCCAGAAACCAATAAGTTTG GTGCTTCTGTAGAAGACTGGCACAATTATATAAAGGAAAACCCAGAAGCTGCACAATTTCAGTTTAAAGAAATCCAGTTTAAAGACAAATTGGATGTCAT CTATGATGGAGAAGTGCAAACTGGGGAATCGAAAACTATAATTAGGCTTAAGAGGCAGAATCATACTTCAGCAACATCTCCTTTGTATGGAAAAGAGCAA GAGAAGAAACGTAAGAGTGTTGGTAGGGATTGTGGATTAAATAATTCCGTTGTAGTTAATGCTATACCAATCAATATGATTTCAAGTGAGCAAAGCTTCT CCAGTTCACCACCTCCTATTGTCAAAGCCAAGTGGACCCCTCCAGTTCACAAGATCTTCCTTGATATATGTCTGCAAGAGACGTTAAAGGGGAATAAGCC TGGGAATCATTTTACAAAGGAAGGTTGGAAGAATATTATTGACTCCTTTTATTCAAAAACTGGTTTGAATTATGATAGATTACAGCTTAAGAATCACTGG GATCTTATCAAGGGACAGTGGAAAATTTGGTGTAAGCTTCTTGGCACCAGTTATATGAAATGGGATCCATCAAGCCAGAAATTTGAGGCTAGTGAAGAAG ATTGGACCAAATATTTACAGTCAAACCCAGATGCTGCACAATTTCGCCTTAAGGAACTGCAATTCACTGACATATTGGAAACCATCTTTAATGGAACTTC AACTACTGTTACAGAGGAGATTGAACCTGCTGTGCACCAAAGGAAAAGTGATGATAGCGAAGTTACATTCCCTTTGCATAAAGTAGAAGCAAACACAGCT AAATTAGATGAGAAAACCAACTATCCTTCTGATGCTACAGCGTCAAGAAATGTTGTGAATATTCGAAAGAGTGCTACTGCAATTTCATCTACTGAAGGCA AACGTAACTATACTATCGGTGAATGCATTGAGTGCCTTGATAGCATGGAAGAAATAGAGCAAGGAAGTGACCTCTACTTGTTTGCTTTAGATGTATTCCT GAAGCAGGAATATCGGGAAATTTTTCTGCAATTGAAAAAGCCTAATCTGAGGGTCTCATGGTTGCTGCGGCTTCAGTCTGCTGGTGCACCTTTATTCTAG GTTTTGTCATTCCTCATCTTTATCTTACATTTCATATAATTTGGTGTTTATGTAGTCGTCCGTTCCTTGTATGATAATATAAAATTGAGAGGGCTATATT GCAAACATGACAATGTTGCCTGGAACCTTCAAAGTTTATGTTAGTAGCTCCTTAATGTAACAGCTGATAAATGGTAGTGAAGCCTCTTTTCCGTTGTTTT ACAAATCTCTGGCATATTTTGTTGCCAGTATTTGTACGGTTTTAAATTAGTCAGATAGAATACCTGTGTTAACAACCAGACCATTTCAAAATCAATTTAT GTAGACTTGTTATTTAAACAATCTCCATGTCAACTGTTTTCTTGTACTAAGAAACTGTTAAGAAAAGTGGTCAAACTAAAGTTTTTAACACTCAACAGAG GAATGTTTGATTCCAAAAACAAGTATTTGAGTTCGTGAGCCTTTGAAGTTTGAAGTCCCATTATGAAATACCCCAAGCTGCAGGATCTTGTTCTTAAGCT CAAAACAAACTGGTTTCCAGTATCTTTGCTCTCCATCTGCTGCCCAATCTGGTCACAAATAGGGTCAGGAAGCAAAAATACATGCATTCCTGTATCTCGA AAGGTCCATGCTCCATATCGCCGCTTATGATACTTCATTCAGATGCCCTTCTTTTGTATTGCATTCCTCTGC
• Tissue: pods
• Gene name: LI_gene_123078;
• Additional information: details;

Expression of Ll_transcript_523685

FPKM

• PAB: 1.2
• PNAB: 7.2
• PS1: 8.1
• PS2: 7.2
• PS3: 8.7
• PW1: 5.4
• PW2: 4.1
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523685

• Blastp: L10-interacting MYB domain-containing protein from Arabidopsis with 42.98% of identity
• Blastx: L10-interacting MYB domain-containing protein from Arabidopsis with 42.65% of identity
• Eggnog: NA(ENOG410YZWQ)
• Kegg: Link to kegg annotations (AT5G05800)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430599.1)
• Pfam: Myb/SANT-like DNA-binding domain (PF12776.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;