Ll_transcript_334453

• Id Trinity: TRINITY_DN22820_c0_g1_i1
• Name Transcript: Ll_transcript_334453
• Sequence: AAAGAAACAATGTGCCTTTTCATAAACCCTAACTAAACCTCTCTCCCACAGTGGTAGCAACAGCGAGAACATGAACTACAACGGCGGAAAATGGCTGATC CGGCGGCTAAGCACGGAGGCAAAGAAACTAAGCCTTTACCGACAGCTATCGGCGCTGGAAATGGCCGGAGGCACCGTGTCGCAGACGCTGAACCAGTATG TATTGGAAGGCAAATCCCTACAAAAAGAGGAGCTTGAGAGATGCGTCAGGCAGCTTCGAAAGTACCGCAAATTTCAGCACGCACTCGAGATAATGGAATG GATGGAGTTAAGGAAAGTTAATTTTGCCTCAGATAATTATGCAATTTATTTAGATCTTGTATCCAAAACCAAAGGGTTGGATGCAGCTGAGAATTACTTT AACGATCTCCCTCCTGAAGCGAAGAACAAATATACATACGGTGCTCTTTTGAACTGTTACTGCAAGAACCTAGTGACAGATAAGGCATTAGCTCATTTTG AAAAGATGGACGAACTCGGTTTTGTCACTAATCTGGCTTTCAACAATTTGATGTCTTTGTATATGAGATTGGATCAACCTGAGAAGGTGCCTCAGTTGGT GGATGATTTGAAGCAGAGGAAAATCCCTATGGCTGCGTTTACGTATCATATCTGGATGAATAGCTATGCGTCTCTAAATGATCTCGATGGGGTTGAGAGA GTCTACGAGGAGATGAAAAGAGAAGATGGAGAAGAAATTAGTTGGCTGACGTATAACAACCTTGCAGCTATCTATGTGAAGACTAAGGATTTTGAAAAGG CTGAGTCAATGCTTATGATGGTAGAACAAGAAGTGAAACCTCAGCAACGTGAAACTTACCATTTCTTGCTTAGCCAATATGCCTCAACATCTAATTTAGC AGAGGTTTATAGGGTATGGAATTCCCTCAAGTCAATCCTCCCCGTGACCAACATGAGCTATCTTACCATGCTTCACTCTCTTCGAAGGCTTAATGATTTT GAGGGAATAATAAAATGCTTTAAGGAGTGGGAATCTAATTGTGGTAGTTATGATATGAGGTTGGTTAGTATTGCCATTGGTGCTTACTTGAGTCACAACC TGCATGAGGAAGCTGAATTGGTTTTTAAGGAGGCTATCAGGAAGAGGAACAACGGAACTTTCTTTAAGATTCGCGAAATGTTTATGATATATTACTTGAA AAATAGTCAGTTGGATGGTGCTCTGAGCCACCTAGAGGCAGTCTTTTCCGATGTCGAGGGTGAAAAATGGCGTCCGTCTCCAGAAGTTGCAAGTGCTTTT CTGAAGTATTATGAAGAGACAGATGTTGATGGCGTCGAGGAGATAAGCAAGATTCTCAAGAGTCACAATTTAGATTATTCCTGGTTCAAATCATCTCCTG TGATTAATGAAACACTGGAGGAAGGTTCTCAAGTAAACCGTGCACTCTAGAACTTGCAAGCAGATGTTCAGTCAGAAATGGTTCATCATTGAAAAACAAC TCTTTCTGCAGCATGTGGGTACAAGTTATGTGAAGCAAGCAATTAAATCATTTTGGATTTTGGCATGTTACGTAAATCTGTGTTAGATTCTTTTGCTATT GCTGATTCAGTTCACTTCTCTTTTAATGTAAGAACATAATTTGGTCTAGCAAATTTTCTTTGAAAGACTCACTTCAGAATAATGTCTCTTTTCTTTTGGA TAAGGCTATCTCAAAAGTGAACATATCTTTTATCCCAAAATGTGTGTTACTTCATGTACCATTTCAATTTTATTGGTCAAAAAATATACAGTTAATATAT ATTTAATTCTTGTTCTATTTTTTTGGCCAATAAAAAGCAAAGGAGACCTGAAGTGATACACATCTTAGGATAGAAGATGTTACTCTGTCACAAAGCTACT AAGACCAAAATCTTTGTTTCTACTATTGTTTTCTACAGTATTAATGCGAATGATTTACCTGTCAAAAACCTCTTTTCTTTCTTGTCTCCTGACTTTTGTG TCATGTGCAGATCCAATTTTGAATCTCCC
• Tissue: pods
• Gene name: LI_gene_123173;
• Additional information: details;

Expression of Ll_transcript_334453

FPKM

• PAB: 0.1
• PNAB: 15.8
• PS1: 7.1
• PS2: 6.3
• PS3: 5.9
• PW1: 6.6
• PW2: 3.7
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_334453

• Blastp: Pentatricopeptide repeat-containing protein At1g02370, mitochondrial from Arabidopsis with 50.93% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g02370, mitochondrial from Arabidopsis with 50.93% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G02370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441287.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;