Ll_transcript_351936

• Id Trinity: TRINITY_DN22971_c0_g1_i1
• Name Transcript: Ll_transcript_351936
• Sequence: ATTCAACACTGTTTTTTCCAAGCCACATTTGTTATGGCCATTTCTTCTTCTTCAGATTGGTCTCTTCTTTGTTTCAGAACAACTCACGTGCATGCATTCA TACCCACGTGCCATTTCTCTTCCTTTTACACTGTCTCTTGTTCCAATCCTAGGTTGTTGTTCCATGTAAATTTCTCAGCTTCTCCTACACCCATTTTAGA AGAAGAAGCTTCTTCCAACAACAACAATAACAAAAACACCCCTTTGATCCATGTTGATGTTAACATTGCATATGATCAACAATATTCCAAGTTAGGAACT GAGAATTTGAATGAATTTCTATGTGGGTTGTTTGAGGATCCAAAAACTGAGGAACTTGCATATGAATGTTATCTAAGATTGAAAGAGAGGCCAGAGTTTA GACCAGTGAGATCAACTTTGAAACATGTGATAAGGTATTTGTTGAGATTGAAGAAATGGGATTTTGTTTTATCACTTTCTGAAGACTTTAAGGTTTATCA TGTGTTGCCAGATAAAGTTACTTGCTCTAGGTTGATTAGTTTTTGTATTAAACATAGAAAATTCAAGATTGTTGATGCACTACTTCATGCTTTTGAATCT GATTGTGAAGTTTCTGTTTTAGCCTTTGGTTCTGCTATGAGAGGTTATAATAAGCTGCATATGTATAGGAGCACTGTTTCAATCTATGAAAGAGTGAATT CATCTAAATTTGTTTTGGATTCTATAGGTTATTTGAATATTATGGAAGCTTGGATGAAACTTGGGGATAGTGAGAGAGTGGTTCAATTGTTTCGTGAATT CGAAAGTAGGAAGTTGAGAGGTTCAACAATATATTTAGCTAAAGTATATAGGATACTATGTGAGTCCTTAGGGAAATCTGGAAGAGCTTTTGAAGCTCTT GATTACTTTAGAGAGATGAATAAGAAAGGAATTTCTGAAGATTCTATTTACTCAACATTGATATGTTCCTTGGCAAGTTTAAGAAAAGTTGATGTAGTTG AGGAACTTGTTAAAGAGGCTAAAAGCAAAATAATTATAAGGGACCCTGAGGTCTATTTAAAGCTTGTGATTATGTATGTCGAAGACGGTTTGTTGGAAAA GACTTTGGAAGTTGTTGAGGCAATGAAGGATTCAGGTCTCAAGGTTACTGATGTTGTATTATGTGCTGTTGTCAATGGTTTCAGCAAAAAACGAGGATTT TTATCTGCGGTTATGGTTTATGATAAGCTGATTTCTCGAGGCTATGAACCCGGTCAAGTAACCTATGCTTCAATTATAAATGCCTGTTGCCGTGTCGGGC AATATAGCAAAGCGGAGAATTTATTTTCAGAGATGGAGCGAAAGGGGTTTGATAAATGTGTTGTGGCATATTCCAGCATGGTTGTGATGTATGGTAAGAC CGGGAGGTTGAGTAACGCGATGAGGTTGGTGGCGAAGATGAAAGAACGAGGGTGCAATCCGAATGTGTGGGTTTACAATTCCTTGATAGATATGCATGGG AGGGCTAAGGACATAAGGCAGATTGAGAAGCTGTTGAATGAAATGAGGAGAAGAAAGGTAGCGCCGGATAAGGTCACCTACACTAGCATCATTGGTGCTT ATCAGAAGGCAGGAGAGTTCGAAACATGCATAAAACTTTTTCACGAGTATAGGAATAATGGAGGAGCGATTGATAAGGTCTTAGCCGGTATAATGGTTGG TGTATACGCAAAGGTTAGTCAGGTCGAAGAACTGGTAAGACTTTTACAGCAACTGAAAGTGAATGGAACAAGTTTAGATCAGAGGTTATATCAATCTGCT TGGAATGCTTTGACAGAAGCTGGGATGGAACTACAGGCAAGGTGGTTGAAAGAGAGCTTCAATTTAACATAATGTTCGATCAGTTGCGAACAATGTCCAA TTCCGAACTGAAGGTGAAATTTTAGAAAGCAATGAGTAGTTTCATGCCTGTTTCTGCAAGCACTAGGGAAAAAGATTTGAGTACTCATGTATAGATTTTG GGGCTGAAAAGCTCTTGTTTGTACAATTTCGCGAACTTCTTTTGATTGTATGCTTTCAAATTGTACTCAATATAATGTTTTTTAATGTGACTTACATAAC AAGTAAAAGGTCATCTCTAGGAACTAATAATCTATTCTCTAGGAATTATTTCTGATTGAGTGTTGCATCCATTGAATTGCGGAGTTCTTTTTTTCTTTCC GGTGGATTACATTGCAG
• Tissue: pods
• Gene name: LI_gene_123222;
• Additional information: details;

Expression of Ll_transcript_351936

FPKM

• PAB: 12.9
• PNAB: 18.1
• PS1: 17.1
• PS2: 6.5
• PS3: 9.3
• PW1: 16.4
• PW2: 18.7
• PW3: 19.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351936

• Blastp: Pentatricopeptide repeat-containing protein At5g13770, chloroplastic from Arabidopsis with 48.69% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g13770, chloroplastic from Arabidopsis with 48.47% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G13770)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456602.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;