| Id Trinity | TRINITY_DN23482_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_307657 |
| Sequence | ACTAAACTTGCAAAGATATTTGCTTTTTTTAGTACCACCATCTTTCCTACCACATCTCTCTCACATTGTTCATATGTAAACTTTCATCTGCATATTAAGT ATTAACTTCTTTTCTTTCCATTAGTGTAGACAAAGACCAATGAGTGCTGGAGACAGGACAAAAATGAATGAGCAAAGTGGTTGCTTTGATCCCAACACAA TGGCAGAAAGTGAAAACTCTATGAAAGATAGTTTTCCTGAAACACTGCAAAACCCACCACTTATAGTTGCAGACAATACAACAAACAGCAACTATAACAA CCTTGAAGAAAATCTCAGGCTTTCTGTGGAGGAGCTTTCATATCACCACCACCACAATCCACAGCATTCTGAAGATCTTTCCACCTATGCAAATGGAGTG ACCCCTACATCTATGGACATCTCAAATCCACATCATATGGCTTTGAACATGGGAAACTCTTACAACTACAACAATATGGATAATGATATGGTCCAAGAGG TTATTGATGTCTATCAGCAAACTACTTGGGACACTAGTGTTCAGGAATTACAGGATATGGACTATGCTAATCATCAAGAACACCAACAACATGAACCACA GTTTCATCAAATTGAGGCACAGCATTGCAGCCAAAGCTACAATCCCTCTTCCATATTGGACCCTCCTCCTCCTTACCCTTCAACAGATCTCCTAAACTTT CTGCACTTGCCAAGATGTTCAGCTTCATCTTTGCTATCCAATCCCACCATTTGTATCCCAAACCCAACTCACAAGACACCGAACTTTCAGAACTCGATGG CCTTTCTTGGAGACCTTCCAATAGGATCCGATAACACAAGTGCATCATCGGTTTTGTATGATCCTCTATTTCATTTAAACCTGCCTCCTCAGCCTCCAGC CCTCAGAGAGCTGTTTCAGTCTCTCCCTCGCGGATACAGCTTGCCGACCAGCTCCAGGAATGGTTCCCTGTTTGGTGGAGGGGATGAGATGGAGGGAGAT GGGAGCCAGCTTGACATGGGAGTGCTAGAATTCGATAGGGGTACGGTTTCTGTTGGCAAGGGAAAGGAAGGAAAAGGTACCAAACATTTTGCAACTGAGA AGCAAAGAAGAGAGCAATTGAATGGCAAATACAAAATCTTGAGGAGTCTTATTCCAAACCCCACAAAGATTGATAGAGCATCTGTGGTGGGTGATGCCAT TGAGTATATAAGAGAGCTGCTTAGAACTGTCAATGAGCTAAAATTATTGGTGGAGAAGAAAAGATATGGGAGGGAGAGGTGCAAGAGGCATAAAGCTGAA GATGATGGTGCAGAAAGTTGCAACATAAAGCCTTTTGGTGATCCAGATGGGAACATAAGAACCTCATGGCTTCAGAGGAAATCCAAAGACAGTGAAGTTG ATGTACGGATTATCGATGATGATGTTACAATCAAGCTCTTCCAGAGGAAGAAGGTTAACTGCCTTCTGTTTGTCTCCAAGGTTCTGGATGAACTTCAGTT GGAACTTCAACATGTTGCAGGTGGACATGTTGGTGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATTGAAGGTTCTTCTGTGTATGCAAGTGTCATA GCCAACAGGGTGATTGATGTCATGGACACTCAATATGCAGCAGCAGTTCCGCATACAAATAGCTATTAGAGTTGGAAGGATAGTAACAAGATCAGGCATC GAATACCTCTGTTATTTGCTACTGACATGTATGAAACAATAACATAAGATAGTGATAATAACTATATTAGCAATAAGTTCATGGGCAATACCCAGTAGAC AGTGAAAATTACAAGTTTAACTGTTTCTGACTTTCTATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_123393; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_307657
| Blastp | Transcription factor bHLH10 from Arabidopsis with 37.2% of identity |
|---|---|
| Blastx | Transcription factor bHLH91 from Arabidopsis with 43.7% of identity |
| Eggnog | basic helix-loop-helix (bHLH) family protein(ENOG4111NJY) |
| Kegg | Link to kegg annotations (AT2G31220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464543.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |