Ll_transcript_367370

• Id Trinity: TRINITY_DN23748_c0_g1_i1
• Name Transcript: Ll_transcript_367370
• Sequence: CTCCACGGGACCACAAACGCACATTGCAATGTTCTTCTTTTTTTCATATATGCCCCTCATCCCACTTTCATCAAATGCTGTTTCTTTCTCTTTTGATCAA TTATACTGTAGCTTCTAGCCTTAAAGGAACTGTTCTAATAGGACTCATTTTGTTCTTCTTATATATACCAACCTTGTTTGTTCTGTTCCCTGCTTTATAT AATGATCCTTGGATGATATATCCTACTATTTAGGGAGCTTGAAGTGGAAGATAACCTTGTTATTAGGGAAGAAGGAAGAGTAACATTCAATCAATCATGT CTTTGATGATGGATGAATAAGCAAGGTAACACTTTTTTGACCATAGAAAGCCACCAATTAAAGAAAAGCAACTTGTGTTGAAAAGTTTCCTTCTCTCCAT AGCTTTTTTCATTGCTTCTTTCTTCCTTCCTTTCTTTCCCACACGCTTCTTATCTTTCCTCATCAATAAGCTCTCAAAGTTCAACCCAAGTTCTGTTAAC CTTTCTCATTTGATAGAAGGGTATGCAAATGATGGCTCAAGTAAAGATTGATGCTTTCATGTGTCTAGAAACAAAAATGAAGGGTGGTGTTTTGAGTAAT GAGAAGTTGGATCTGAAGGTGATGATTGAAGAGTTGGAGTCAAATATCGAAGTGCCTTTAGTGTTTATATGTCCAATCTCATTGGAGCCAATGCAAGAGC CAGTGACCCTTTGCACAGGTCAAACGTATGAAAGATCCAACATCCTTAAATGGCTGTCACTTGGTCACAAAACTTGTCCTACAACAATGCAAGAGCTTTG GGATGATTCTGTCACACCAAACAAGACTTTGAGCCATTTAATCCTCAGTTGGTTCTCTCACAAGTACTTGGATTTGAAGAAGAAGTTAGAGGATGTGCAA GGAAGAGTTTTGGAACTCTTGGACATGCTCAAGAAGGTTAAAGGTCAAGCTAGAGTTAAAGCACTTAAGGATCTAAGGCGAATTGTTACTTCTCATGTGT CTGCAAGGAAGGTTGTTGAAGAAAATGGTGGGATTGGTTTGGTTTCTTCTTTGTTGGGTCCTTTCACTTCACATGCTGTTGGGTCTGAAGCAATTGGGAT AATTGTGAATTTGGATTCGAGTTTGGAGTTGAAGAGAAATCTTATGCATCCAGCTAAGGTTTCATTGGTGGTGGATATTATGAATGAAGGAACTATAGAG ACAAAGATGAATTGTGCAAAGTTGATTGAGGTTTTGTTAATAGAAGGGAATGATTATGAGACTGAAATTGTGTCAAGTTTGAGTCTTTTAGTTGGGTTAT TAAGGTTAGTGAGGGATAAGAAAAACCCAAGTGGGGTTTTAACTGGGCTTATATTACTTAAGTCTATATGTTTCCATGAATCAGTTAGAACTTCTTTGGT AAGCATAGGAGCAGTTCCTCAAATGATTAAGCTTTTGCCTAACTTGAATAATGAGTGCTTAGAAATAGCACTTCATATTCTAGAGGTGTTATCAACTATT CCAGAGGGAAGATTGGCTTTGAAAGAATGTCCAAATATTATTCCTTATGTGGTGAAGTTATTGATGAGAGTTTCTGAGAGTTGCACACAAATTGCATTAT CAATATTGTGGGCTATTTACAAGCTTGCACCAGAGGAATGTGCTACACAAGCAGTGGAAGCTGGGTTGGCTGCAAAATTGTTGCTAGTAATTCAGAGTGG CTGCAATCCTGTGTTGAAACAAATGTCTTCAGAGTTTTTGAAAATGTGTAGTGTGAATTACTCTGCTAGTATCTTGATTTCTAAGTGTATGCTCACCACA ACAATACAATGAAAATTAAGTAAATTTTGTTCATAGTTTCATGTACAGCCCACTATGTCTACAATTTTTCCTTTTTAATCTAAAAAAAATCATCTTTATG AAATTCTCCTTTTTTATTTTATTTTGTTCATAGATCAAATGCAAATCTAATGTATATTATATAAACTACTTGGTGCTCAAATCTGCATAGATGTCTTTGA TAACAAACATGCTATTGGTAGAGGGGCAACAATGATGTCAAACGAGTACCAAATATGATGCTTTGCAATGGTTGAGTGAGTGCGAGGGACAATAGCGTGT TAGTGTATGTCAAGG
• Tissue: pods
• Gene name: LI_gene_123488;
• Additional information: details;

Expression of Ll_transcript_367370

FPKM

• PAB: 18.7
• PNAB: 10.5
• PS1: 8
• PS2: 1.4
• PS3: 2.4
• PW1: 18.2
• PW2: 12.6
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_367370

• Blastp: U-box domain-containing protein 30 from Arabidopsis with 63.37% of identity
• Blastx: U-box domain-containing protein 30 from Arabidopsis with 63.37% of identity
• Eggnog: Ubox domain-containing protein(ENOG410YIZZ)
• Kegg: Link to kegg annotations (AT3G49810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431880.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;