Ll_transcript_340517

• Id Trinity: TRINITY_DN24395_c0_g1_i1
• Name Transcript: Ll_transcript_340517
• Sequence: CCCAAAGCCACTCATAGCTTTAGAGCCACATCCTAGATTTATTGGAGATGAGTTCACTAGCACCATATTCACTTTGGACTTCCCTGCAACCCAAAAAAGC TACCAACTATTCTTCACCAAAATCATCAAATCTTGTATCATGTAATTATAATCATCATAAGACATTATCAACTTCTCACTCACTAGTACTCCTACAAAAT GATGAGACCAACCCACTGAGCCAGTTGAGGAGAAGAGATGCATTAACACTTTCATTGAGTCTTGGCCTTCTTCATGCTTTCTTCTATCCACAACAAACAT TAGCAGCAGTTGAAGAAGTTCCATGTCAGTTAACTGTGGCTCCTTCAGGCCTTGCCTTTTGTGATAAAGTTCTAGGGACTGGTTCTCAGGCTGTTAAGGG ACAGCTTATTAAGGCACATTATGTAGGGAGATTGGAGAATGGGAAAGTATTTGACAGCAGCTACAATCGTGGCAAGCCGCTTACATTTCGTGTGGGTATC GGAGAGGTCATTAAAGGATGGGATGAAGGAATTTTAGGAGGTGATGGAGTTCCTCCAATGCTTGCAGGAGGAAAACGTACGTTGAAGCTTCCTCCGGAAC TTGCATATGGCTCTAGAGGGGCTGGTTGTAAAGGAGGTTCATGTGTCATTCCTCCTGATTCGGTTCTCTTATTCGATGTGGAGTTCGTGAGCAAAGCATG ATTACAAAGCTGTGTGCAGCCAAATTACCTTCCTTTTTCTTTCAGATTGGTGCTTAGTTTTATATTTTCCTAACTTGCATATGTTTTGTGTACTCAGTCA TAAATCATTTTATATTACATACAATTGAAAGTGATAATGATTTCAACTTCTAATCCATCCATTGATGGAGAATCAATTCTAAAGTTAAAGTAAAACTTGA CTCATAAATTCATGACTGAGTAAATAACATGATATGTATGTCTACCAAGTTTTGATATCATAAACAGAGAAATTGTAACCCAAAGTTGAACAGTGA
• Tissue: pods
• Gene name: LI_gene_123696;
• Additional information: details;

Expression of Ll_transcript_340517

FPKM

• PAB: 6.6
• PNAB: 31.1
• PS1: 7
• PS2: 5.2
• PS3: 5.4
• PW1: 24.3
• PW2: 15
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_340517

• Blastp: Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic from Arabidopsis with 57.01% of identity
• Blastx: Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic from Arabidopsis with 78.03% of identity
• Eggnog: Peptidyl-prolyl cis-trans isomerase(COG0545)
• Kegg: Link to kegg annotations (AT5G45680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462527.1)
• Pfam: FKBP-type peptidyl-prolyl cis-trans isomerase (PF00254.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;