| Id Trinity | TRINITY_DN24532_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_452616 |
| Sequence | ATTAAAGACAGACACATGGGGCTGTGAATCTATATCTAACAAATCATTGGTTGGTTTCTCATCCAAAACCCGAAACAGAAGATAAGACGATAAGCCCACG TGGCAAAAACCCAATACTTCTTTTTCTCTTCTTACAAACACAACAAAAACTTCAACCTTTTTTTCTCTCCTTCTTCAATTTCCTTTCACAAAGCCATGGC TTCACCAACACTACTAACTCCAACATCTACACCCACCAAATCTCTCCCACCCCTTAATCCCAAAACCACCACCATTTCCGCCACTCTCACACCACCAACC ACCACCCCACGCCGCCGTGTCTTTCTCTCCATGACTGCCTCCACTACCACATGTTTTTTTCTTCTTCCCTTAACACCTGCACTAGCTGCTTCAGATGAAG AGTACGTAAAGGAAACTGAGGAAGTTATCAACAAGGTGAGAACAACTATTACATTGGACAAGAATGACCCTAATGTGGCTGGAGCTGTTGCTGAGTTAAG GGATACCTCAAACTCTTGGGTTGCTAAGTACAGAAGAGAGAAAAATCTTCTTGGTAGGGCTTCCTTTAGGGACATGTATTCAGCACTCAATGCAGTTTCG GGACACTACATTAGTTTTGGGCCAACTGATCCTATTCCTGCAAAACGAAAGGCAAGGATTTTGGAAGAGGTGACCACTGCAGAGAAGGCACTTCAAAGAG GAAGATGAGGAAAGCAAATTTTATTTTCTTTCTTCCCTTGTTTGTAACTTGTAAGTGTTTTTTGTTGTTGTTGATATGAATATTGTATGAGAATCTTGAA TTACAGTTTTCTGTTAAATTCAGAGGATAATAGGGACATGTGGTCATAGTAGAGAATTATGAGGGCATTTTCTGTAAATATGAAAGGGCCTAGTAAATCC AACCACTGACAAATATGATCATATTACTCTGCTAATAATGTTCCTCAGCTTTCTTTAACGTTCTTTCCTTCTTTTGACTCCTTAGCATTTACCTGTTTTT TGGTGTTGTAAAATGTTTAAGTAGTTACTTAGCATTTGATAATGCTTCATATTAGCCATGACCGCATGTGACTAAAATGATTGAAATAAATGGGAAAATG CGAATTAAAGGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_123735; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_452616
| Blastp | Photosystem II repair protein PSB27-H1, chloroplastic from Arabidopsis with 61.24% of identity |
|---|---|
| Blastx | Photosystem II repair protein PSB27-H1, chloroplastic from Arabidopsis with 66.42% of identity |
| Eggnog | Photosystem II(ENOG4111SBP) |
| Kegg | Link to kegg annotations (AT1G03600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437370.1) |
| Pfam | Photosystem II Pbs27 (PF13326.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |