Ll_transcript_477679

• Id Trinity: TRINITY_DN25001_c0_g1_i1
• Name Transcript: Ll_transcript_477679
• Sequence: ACTTTGACTATACAACATTACAACATATTCTCTATCTCTAAATTTTCCTTCTAACTTTACACCAAAAATCAAAGAAATGAGTGATTTTAATCCAAGCCAC TTAACAATGTCACCTTATCCTGCAACCTTTTCCAAAACAAACAAATCCAGCATGCCCATGTTATACTATGGTTTAGCAATGGTTGGAGCTGCAGCAATAG CAATAATCTTATACAATCTCATTAATATCATTACCAAAATGTGCAACCAGAGCCACATGCAATCATCACAAGATGAAGTGGTTATTGATGTGGCCATAGG AAGTAGTAGCATGAGCTTTGATAATTCAAGAGGGAACTTGCTTTCAAGCTTTAAGTATAAGAAAGAAAATGGTGGTGGAGATGATTATGAATGCTCAGTT TGCTTATCTGATTTAGAAGAAGGAGAAGAGGTGAAGAAGCTACCAAGGTGTAAACACTCTTTCCATGTTCAATGCATTGATATGTGGCTTCATTCTCACC ATGATTGCCCAGTTTGTAGAACACATGTTGCCCATTCTTGTCACCAGAATGTGACTCAAGTCATGCTGGCAACAGGTGGCATCTTAGTTTGACGGGTCGG GTTCTAAATTGTGGTTGCAGTTATATTATATGCATGAAAATTGTGAAAAAATACCATCTTAATTGTAATTGTACTCCATAGCATATGTTTATGGAGATTA TT
• Tissue: pods
• Gene name: LI_gene_123872;
• Additional information: details;

Expression of Ll_transcript_477679

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.3
• PW1: 0
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_477679

• Blastp: RING-H2 finger protein ATL52 from Arabidopsis with 34.01% of identity
• Blastx: RING-H2 finger protein ATL52 from Arabidopsis with 34.01% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT5G17600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455151.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;