Ll_transcript_443907

• Id Trinity: TRINITY_DN25123_c0_g1_i1
• Name Transcript: Ll_transcript_443907
• Sequence: TGTAGATCTCATCTCAAACCTATTCTCAGAAGGAAGAAAGTAACTTACCTATAACATCAAAGAATTTCATGCCTTTCATATACTTTCCTTTGTCCCCCAA AATTTACTATCCTTTTAGCATAATCACTCAACCCCATCACTCTCCATTTAACTCCTCCCAACCCAAATATACATTTGCTACAACATTAAAATGAAACCTC AAACTCCCTACACCAAACACATAATTTCCAACAACCTATGTCTCAAACTTCTCATTATGCTCATTCTATGCATCCAAATCAACAAGTGCCAATGTGAGGA TGAGACTAAAAAGACACTAACTTTACCACTCAAATCACAAGTTATCCCATTTGGGTATCTCCCAAGACCACCCAACAAGCTTAGATTTCAACACAACATT AGCCTCACTGTCTCCATAACTGTTGGAACTCCACCACAGAACATGACATTCATCATTGACACAGGAAGTGAACTTTCATGGCTCCAATGCAACACAACCA ACCGGGTCATACCCGACCCACTTTATGACCCGACCCATTTACCACCTTACACAACCACCACTTGCTCATCACTAACTTGCAACATGGAAAACAAAACCAT GAACCGGGTTTCATCTGACCCGTTTTTTGACCCGACAATTTCATCTTCTTACATACCTATCAAATGTTCCTCACCCACATGCATGACCCAAACCCGAGAT TTTCCAATACCTGCTTCATGTGACTCCAACAAACTCTGCCATGCAACACTCTCCTATGCTGATTCTTCTTCCTCTGAAGGGAACCTTGCTTCAGATATGT TCGGGTTAGGATCCGGATCCGATAACCCGAGAATTGTATTCGGGTGCATGAACTCTACTTATAGTAGCACCAACTCCAACACAACCGGGCTAATGGGTAT GAATCTTGGGTCACTTTCATTGGTTTCTCAGTTAAAGATACCCAAATTCTCGTATTGTATATCGGGTTCGGATTTATCGGGTGTTCTAATTCTGGGAGGG TCCAATTACTCGTGGGCCGGGTCGTTGAATTATACTCCCTTGGTTCAAATCTCTAGGCCTTTGCCCTATTTTGATCGGGCCGCTTACACGGTCCGGTTAG AGGGAATTAAGGTTGCGGATAAGTTGCTTAATATATCGGATACGATTTTTGTTCCGGATCACAGTGGTGCGGGTCAGACCATGTTTGATTTAGGGACTCA ATTTACTTATTTGCTTGGCCCAGCTTATGTTGTCTTAAGAAACGAGTTTTTGAATCAAACGAATAATACTTTACGAGTTTTGGATGATCCAAATTTTGTG TTCGAAATAGCAATGGACCTTTGTTATCGAGTTCCGTCAAACCAATCGAAATTACCGGAGTTGCCAAGTGTTAGTTTAATTTTCGATGGGGCCGAGATGA AAGTTTCGGGTGAACAACTTTTATATCGAGTGCCGAATGAGATTCGAGGAAATGATTCAGTGTATTGCTTCACATTTGGGAACTCTGATTTGCTAGGTGT AGAGGCCTTCATAATTGGTCATCACCAACAACAAAATATGTTGATGGAGTTTGATATTGAGAAATCTAGGGTTGGTTTGGTTGACATAGATTGTAATTTG GTTGGCCAGAGATTGCTTGGTTTGGATAACTAGACCCACACGCTAGATTGGGGCATTATTCATGTTGAAATTATGTGGTATTATCACCAAAAAGAGTCAT TTGAAGAATAACTTACATTGCACTGCAAACTTAAATAATGTTAATATACTGTACTGCAAATTAGAATGAATGTGTATAGCTAATATCCTAATCCAAACAA TAGATGAATAAAGTTGAATGGTCTTTTTGTGCTTTCAATAACCTATAATAAAC
• Tissue: pods
• Gene name: LI_gene_123917;
• Additional information: details;

Expression of Ll_transcript_443907

FPKM

• PAB: 0.1
• PNAB: 0.8
• PS1: 0.2
• PS2: 0.1
• PS3: 0.2
• PW1: 1.8
• PW2: 11.5
• PW3: 4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_443907

• Blastp: Aspartic proteinase PCS1 from Arabidopsis with 51.77% of identity
• Blastx: Aspartic proteinase PCS1 from Arabidopsis with 54.98% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: Link to kegg annotations (AT5G02190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412745.1)
• Pfam: Xylanase inhibitor N-terminal (PF14543.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;