Ll_transcript_401370

• Id Trinity: TRINITY_DN27060_c0_g1_i1
• Name Transcript: Ll_transcript_401370
• Sequence: GTCATAACCTCACTCACTCCCGGAGATACGAAAATGAGACCCACGCGCCGCCAACCCAAAGACTCGTTCATCCCACCGCCCACTCCTCCCGACTTCCACC ACCACCACAACCACCACTTCCGCGACTCCGACGCCAGTTTCGCCAGCAGCCGACCTTCCTCCGCCGGCGTAGGCCCTCGCTCCACCACCTTCGACCTCTA CAAAGACCGTTCTTTCCAACAATCAGCGGTTTCTTCAATCAACTCCTTCCTCTCTTCTCATAACTTCCCAATCACTTTCAAATCCACTTTCCCTTCCGCC AAAGACATTCACGAAACCCTCCGATTCATCCTCCTTGATCTCCTCAACTTCCGTTTCAACAAACTCGAAGACGACCTTCCTCTTCTTCTCAAACGCCTCA ATTATCCTTTCAAATTGAACAAATCCATTCTCAAAACTCCGGCTGCGCCGCACCAATGGCCTACTTTCCTTGCTCTTATTCACTGGCTCATTCAAATTGC CAAGTTCGATCACCACCTCTGTTCCTCCACCAACACCATGTCCTCTATGGTTCAGACTAATCTGCTTCATCAGTACACTGTTAACAGTTATATACGCTTT ATTAACGGCGATGATGACGCGGTTGATGAGCTGGATCACAATGTTAGGGCTGATTTGGTGCACCAGAGGGAGATTGCTGAGGAGAAGGTGAAGGCTGCGA TGGACGAGGTCAAGAGATTGGAGGCGGAGTTGGAGAGGATGAGAACAGAGCCTTCGCGGAAAGAGGCGTTGGAGAAGGAGAAGGTTTTGTTGGAGGATGA TGTGAACAAGTTTTATAAGATAATTGAGGAGTTCACGTCTCGGATTGAGCAGACGGAGAAGGTGATATTGGAAAAAGGGAAGGAGGTGGATGCGAAGATG GAGGAGAATGGGAGGATAAGTGAGGAGAATGAGGAGATAAGGAGGAGGGTGGAGTCGCAGACGTTTAATGCGAGGGATGTGGAGAGGATGAGGAGGGAGT TGCAGGCGGTTGAGAGGGATATTGGTGAGGCCGAGCTTGCTAGGAATGCTTGGGAGGATAAATCGTGGGACCTTGATACAAGCCTTGGTCATAAGTTCAA GGATCTCGAGGCCCTTGCAATGGATTGCAATCAATCCTTAAAGAGGCTGAAGATTGGTAATGGTATTCAGTATCAGTTGAATTCCAATGGCACTACTCCA GCTGAGATAATGGGTATTGATCACAAGTTGACACTGAAGCCTGCACTTAACTCCTTTGCTGATGACATCCAGAAGAGTTCTATGGGGAAATCAGAAGAAT TGATTTCATATCAGCAAAAGTTCAATGAAATTGTTGTTAGGCTTGAGGAGAAAAGAAATCATATTGCCACAGTGCAGTCAAGCATCGACGAAATGGAAGT TCAACTGAACATGAAAAAGAAGGAAGCACAAGACTACAGAAGTAGATGTTCTGCTGAAGCTAAGACAATGTTGGAGGATGTCCAAGTAGCAGTTCATGAC TTGAACATTATGGAAAGAGAGGCAACTGATGTTCTGAAGGCCTCTGAATTAAAGCTACAAGAAGCAATTAAACAAAGTGAGGAAGAAATTCAAATGCGTG CTCAAGAACTCTTTAAGTTGGTTGATTCAGTCTCGAAGTACAAAGAACATGTGAGTTCCAAAATTTCAGAGATGAACAAGACACTGTTGGAAACTGCAAC AGCTGTCTCGGATGCATATAAGGGTTCATTCGCAGCTCAATTTGGTGATATATTCAATAGAAACCGCCAACCAGAGAAAACAAATTCAGTATTTTGAGCA AGAATTGACAAAATTCAGCCAGATTTAAGAGTAGTTGCTTGGTGTAATATAGTAAGTAGTAGGGATCACTCGACAGTATCAAAATTTCTAGCTAAAGTAT GTGGTTGACAAGTATTATATTATTTTTTGTTATTTTTAACATGAGTTCAGAGGACAAAATTTATTGCATTGAACTATTGCAACTTGCTAGATTTTTTAGG TGAGTTTATCTGGGGATATAACATCGCTCATTCGCTCTTACTCAAAACATGAACTGAGGAACGTCCACTGTTAACTCTAATGAAAGAGAACTAAAAAACC TTATATT
• Tissue: pods
• Gene name: LI_gene_124513;
• Additional information: details;

Expression of Ll_transcript_401370

FPKM

• PAB: 0.2
• PNAB: 8.7
• PS1: 6.8
• PS2: 3
• PS3: 4.3
• PW1: 3.2
• PW2: 1.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_401370

• Blastp: Kinetochore protein NDC80 homolog from Gallus with 22.91% of identity
• Blastx: Kinetochore protein NDC80 homolog from Gallus with 22.24% of identity
• Eggnog: NDC80 kinetochore complex component, homolog (S. cerevisiae)(COG5185)
• Kegg: Link to kegg annotations (395134)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426423.1)
• Pfam: HEC/Ndc80p family (PF03801.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;