Id Trinity | TRINITY_DN2776_c0_g1_i1 |
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Name Transcript | Ll_transcript_468641 |
Sequence | ATTCCATTCATCTCAAATGGCACCCACTATCAAATTCATCCCTCTAATCTTTCTTCTCTCCCTATGCTTCACTACAACAATTATATCCGTAAGTTTTCTT CTCCTTATATACATTTTTTATAAGCTAAAGTTTTAATATAGTATATCTAATGTTCTAAACTAAATTTAATACAGAGAGAAGAAGAAGATTGTGTATACAC AGTTTTCATTAGAACCGGTTCAATATTCAAAGGAGGAACCGATTCAATTATTGGGTTGAAACTATATGATAATTTTGGTTGGTATATTTACATAAAAAAT TTAGAATCATGGGGTGGTTTAATGGAGCCAGGTCATAATTATTTCGAACGTGGCAATCTTGATATTTTTAGTGGTAGAGGTGCATGTCTTGACGGACCCG TTTGTGCCGTTAACGTTACTTCTGACGGTTCTGGTGCACATCATGGATGGTACGTTAATTACGTGGAGGTGACGTCAACTGGTGTTCATAAAACTTGTGC TCAGAAACAGTTCACTTTGGAGCAATGGGTTGGTACTGATGTTTCTCCTTATCAGCTTTGGGCTCAGAGGGATTACTGTGGGAATCAAACGGGTTTGGGC CTGGCCCGTTCTAAAACTACGGTCGTCGATGATGTTGGGTCCGGGTCGGGTTATTCGATTTTGGATTTGGGTGTTCGGGTTTAGGGATGTAGTCGTATAA TCGAGTAGTTTGCGGTTGGGGTTTCAGGAGACTATTTAATAGTAAGATGTGTTTCTTTAGACGTGCGGTATGGTTTGAATGTATTAATATGTATGATGCG GGATATTGTTGATCATAGAGTTGACTTGACATATCTATATGGTGGAATTAAGGTTTGAATCTTGTTTTATTATGTAGGATGGTGTTGTCGTGATATTGTT TTAGATCAAGAAAGATGAAATGTGTAGTGGATTCTAGAATTACACAATGATATGTTTGTATTTTTGTGTGATGGTTATAAATTATTCAATAAAGATTTTG CATTAGCAATTGAGTTTAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_124739; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_468641
Blastp | PLAT domain-containing protein 1 from Arabidopsis with 65.12% of identity |
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Blastx | PLAT domain-containing protein 2 from Arabidopsis with 63.5% of identity |
Eggnog | wound stress protein(ENOG410ZKR3) |
Kegg | Link to kegg annotations (AT4G39730) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415958.1) |
Pfam | PLAT/LH2 domain (PF01477.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |