Ll_transcript_468643

• Id Trinity: TRINITY_DN2783_c0_g1_i1
• Name Transcript: Ll_transcript_468643
• Sequence: CAAATAGAAGACATGCCAATGGATAAAATTTACATGAAATACCACGACTGTTTCATGTAAAATTATCAAATATTATTCCACTATCAATGAGTTAATGTTG AAAATGTTGTCTTTTTCAATGTCTCTCATTACCACTGTTGTGTTAAACTAATCCCAAACAACACATGAATATGGATATGGATATTCTTCAATCCCCAACT CTTATTCGTTTCTTCCCATTACATAAAACTACCACAAACACTATCTTCATCCAATTGGGTCATCACCAATATCAAAATGTAAGCAGAATAGATAATGCAA CAACCTCACTCACCCACACCCACCACCTGTTTGATGAAATTCCCCTTTGGGACACCTTTGCTTGGAACACCCTCATTCAAACCCATCTCACAAATAATGA CTTCACTTATGTTTTCTCTACTTACATCCAAATGCTTCAACGTGGTGTTCCCCTTGATAAGCACACTCTTCCCCGCATTGTCCATGCTTCTCGTCTCATG GGTGATTTGTGCCTTGGAAAACAGGTTCATGGTCATGCTGTCAAACTCGGCTTCTCGTCTGATCAATACGTTGTCACTGCTTTGATTGAGATGTATGGCC ATTTGGGTAGTCTTGATATGGCTCAAATAGTGTTCCACATGTCGAAGCCGAATTTGTTTTCTTGGACCCTTCTTGCAAGGTTGTATATTGTTGGAGGGAA GCCGGATTTGGCGATTGATTTGTTTTTGAAGATGGTGGAGAAGGAGAAGTGTAACGTTGATCCTGTGGCGTTGGCAACTGCGTGCAGCGCTTGTGGGCTA ATGAAATCCTTGCAGCACGGGAGGAAGGTGCATGAGATAGCCAGGAAGTGTAGGTTGGAGTTTGAAGTCTTAGTGAGTAACTCATTGTTGAAAATGTATA TTGATTGCGATAGTGTAGATGATGCCAGATTGGTGTTTGATCAGATGCCCTGCAAGGATGTCATATCATGGACATCGATGATCCGAGCTTACGTGAAGAA CTTAGGAGGATTCAATGAGGCTTTCAAATTGTTCCGGCAGATGATCTTGGACGGATTGAAACCAGACTCGTTGTCAATCTCTACCATTCTTCCTGCATGT GGAAGAATTGCTTCACATAATCATGGTAGAGAAATTCATGGCTACTTACTTAGAAACAGGATTCACTTTAACCAGAAAGTCAAGAATGCACTTATGGACA TGTATGTGAAATCAGGAGCTATCACTTCTGCTTCAAATGTTTTTGCTCAAATTAATGACAAAGATACTATTTCGTGGACCGTGATGATATTGGGATATAG TTTGCATGGACAAGGAAAACTCGCAGTTGGTTTGTTTAAACACGTGGAGAAGAAATTAAAGGTACAGGTTGATGACACAACCTATGCTGCTTTACTTCAT GCTTGCAGCACTGCACGCATGGTTGAGGAAGGAAAGATTTACTTCGACTGCATTAGGGCGCCCACGGTGGCTCACTGTGCTCTAAAAGTGGCTCTGCTAG CACGGTGTGGACTATTTCATGAGGCGAGGATCTTTATCTTTGAACGCAAGATCGGAAAGCATCCCGAGGTAGTGAGAAAAATGCTAGAAGGGTGTAGGAT TCATGGTCAATATACTTTAGGCAAGCAAGTCATTGATCAGCTTTGTGAGTTGGAGCCACTAAACGCGGAGAACTACGTGCTACTTCTGAATTGGTATGCA GGCGGTGCAAAATGGCACATGGTGGACAAGTTAAGGGAGACAATTAAAGACATGGTTTTGAAACCCAAAAAGGCTTTCACTTGGACAATATCGAGGAATA AAGTTCACGTTTTCGGAACTGGGGATGTAACTCATCCAAGATCATGGAAAATATATGCACAATTACAGGGTTTCATGAATGAAATGAGAGACGAGGGATT TGAACCAAAATGTGATTTCAGTCTCCATGATGTAGATGAAGAGAGAGAGTGCATTCAGATTGGGCACAGTGAACTCTTGGCACTTTCATTTGGGCTCATC AGCTCACAGGCTGGACCTATCCGTCTCGCGAAAAATTCTACGGTGTGTCATGGCTGCCATGATTTTGCGAAGTTTGTATCCAAGACGACGAGAAGAGAAA TCATTCTCAAGGACCCAAATTTCTTTCATCATTTCAAAGATGGACTTTGTTCATGTGAGGACTTTTGGTGATTATCTTCTTACCAGATTCATTTTTAGAG TTTATCATTTTGATTTTTTGAGCTAGTTCTATATATTAATCACACTTCTTTATAATAATAGAATTCTCCAGAGTAGATGAACATCATAAACTCTCTTCTT TTTCCTTTTTTTCCATGACTCTTCTTATCCGGCAC
• Tissue: pods
• Gene name: LI_gene_124767;
• Additional information: details;

Expression of Ll_transcript_468643

FPKM

• PAB: 0
• PNAB: 1.6
• PS1: 1.6
• PS2: 1.1
• PS3: 1.4
• PW1: 1.6
• PW2: 1.2
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_468643

• Blastp: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 37.67% of identity
• Blastx: Pentatricopeptide repeat-containing protein DOT4, chloroplastic from Arabidopsis with 37.67% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G18750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457241.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;