Id Trinity | TRINITY_DN28177_c0_g1_i1 |
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Name Transcript | Ll_transcript_333742 |
Sequence | ATTGACGTGTATTTTCCAATGAAAGACGACCACGTAAGAATCAAATTTGGACATCCTCGTTGAACTCTTTTCAATTTTAAGACATCACTTTTCCCTTTTT TCAATTCTCTGACTCTCATTCTCCATTCTTCTCACTCACACAAACACACACTCTTCTCTCTCGAATCCCACTATGGCTCCAAAACCTGTTTTTCATCTCC CTCTCTTATTTCTTGTGCTGTTTTTTTCATCGACAACTGAATCCCTCAGATTCGAGCTTGAATCTGGTGCCACCAAATGCATCTCTGAAGACATCAACAA CAATGCTATGACAGTAGGCACATACTCCGTTGTTAATCATAATGAGGGTCACCCCTTACCTGAATCTCACAAAGTCACCGTTAAGGTGACTTCGACTTTT GGGAATATTTATCACCAAGCCGATGCGGTTCAAACTGGTAAGTTTGCATTTTACGCAGGCGAGTCTGGAGACCACGTTGCTTGTTTCACAGCTGCAGAAC ACACTCCCAAGGTTACCTTGACTGTTGAATTTGTTTGGAAATCTGGTGTTCAAGCCAAAGATTGGTCCACTGTTGCTAAGAAGGGTCAAGTTGATGTGAT GGAGCTAGAGGTAAAGAAGTTGATTGAATCTGCTGATGAGATTTACAAAGAGATGGCTCATATTCGTGCAAGGTAAGCATGTGCAATTGCCCTGAAAATT CTTATCCTTAATTAAACACAATGACATAGGATAGTTTAACAAGTATTGTTCTTGTCTTTGTTTACTTGTCTTCTTTCCAGTGCTGATGACACACACGAGC T BLAST |
Tissue | pods |
Gene name | LI_gene_124870; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_333742
Blastp | Transmembrane emp24 domain-containing protein p24delta9 from Arabidopsis with 57.96% of identity |
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Blastx | Transmembrane emp24 domain-containing protein p24delta9 from Arabidopsis with 58.62% of identity |
Eggnog | vesicle-mediated transport(ENOG410XTBQ) |
Kegg | Link to kegg annotations (AT1G26690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432158.1) |
Pfam | emp24/gp25L/p24 family/GOLD (PF01105.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |