Ll_transcript_511036

• Id Trinity: TRINITY_DN28652_c0_g1_i1
• Name Transcript: Ll_transcript_511036
• Sequence: CTCAAATCTGAGACTTTGCTTAGTGAAATCAATCCTCCATCACACCAATAAATTGGTTGACAATGACATTGGATATCTATTCCCTTCCCTTGAACAATTT TCATCCAAGCAACTGAACAACATGATATTTCTGAAGTAACCCAATCAAGTTATGCAACCACTACTCAATTTCTTACATCATTGTTCCTCTTTCCTTCTTC CTTCATAGTCATATTCTGCCATGGCTTCTTTTCCTTCTGTTGCTATCACTCTAACTGCAACTCTCAAGCTCCACCCACAATTCAGAAAATACCCACCAAC CTCTTTTCCCATAGATAAGTTTATGGTTTCAGAGTCAAAGCCTTTCTTTGCAGAAAAACCACAGACTCACTCAATTTGAGCCCAGTAATTTGAATTTTCA GGAAGCACTTTCCTTTTCAAAAGAGAGGACAGAGGATGTAGAATCATCTTACTACTTTCCCTTGTTGCAAGAATGCTTAAAAAGAAGCTCCATTTCATAT ACAAAAGTTATTCATGGTCATGTCACAAAAACTGGTACCCACGAAGATGTTTTTGTGATGTCATTTCTGGTCAATGTTTATGCCAAGTGTGGGAACATGG AGGATGCTCGCAAAGTTTTCGATAAAATGCCGAGGAGAAATGTGGTCGCGTGGAGCACATTGTTGGTGGGTTATGTGAAGAACTCGCAGCCAAAGCATGC TATCCATGTCTTTCATGAGATGTTGTATTCAGGAAGTTACCCTTCCAATTTCGCCCTTGCCATAGCTCTAAATGCTTGTACATCCTTGCACTCTTTAAAG TTAGGGGATCAGTTCCATGCTTACATAATCAAATACCATATTGACTATGACACCAGCATTGGCAATGCACTTTGTAGCTTATACTCCAGATCTCACAAAC TAAAACTTGCTCTAAAAGCATTTAGGAGAATCGATGAGAAGAATGTTATTTCATGGACTACGGCTATTTCTGCTTGTGGTGACAACGGTGAAGCTATGAA GGGTTTGAATCTTTTTGTTGAGATGCTTTCTGAGGGCATACAGCCTAATGAGTTCACTTTAACTAGTGCCTTGAGCCAGTGTTGTGAGATTCTGTACTTA GAGCTTGGGACTCAGGTTCATTCGTTGTGTACTAAATTTGGCTACGACTTGAACCTGCGTGTTAGGAATTCTATGTTGTACTTGTACCTCAAATGTGGCT GTATCAGTGAGGCTCAAATTTTATTTCATGGAATGGATGATCTCAGTTTGGTTAGCTGGAACGCAATGATTTCAGGGCATGCACAAATGATGGAACTCGC AAAGGATAACCTTTCTTTATGCCAAAGTGGAAATGAAGCTCTCAACCTTTTCTCCAAGTTGAACCGGTCAGGCATGAAACCTGATCTATTTACCCTCTCA AGTGTCTTGAGTGTCTGTAGTAGACTGCTGGTTTTAGAGCAGGGGGAACAAATTCATGCTCAGGCCATTAAAACTGGTTTCTTGGCAGATGTGGTTGTGA GTACTTCACTAATTAATATGTACAATAAATGCGGTAGCATCGAGAGGGCAAGCAAAGCTTTTCTAGAGATGTCTACTAGAACTATGATATCGTGGACTTC CATGATTGCAGGTTTTGCACTGCATGGCAGGTATCAGCAAGCATTGCAGCTTTTTGAAGATATGAGACTAGCAGGAGTTAGACCAAATGCGGTCACTTTT GTGGGTGTTTTATCAGCATGTGGCCATGCTGGCATGGCCAGTGAAGCACTCGATTACGTCGAGATTATGCAAAAGGAATATAAAATTAAGCCTATGATGG ACCATTATACTTGCCTGATTGATATGTTTGTGAGGTTAGGTCGGCTAGAGGATGCTTTTAATCTTATCAAGAAAATGGATTTCGAGCCTAGCGAGTTTAT TTGGTCAAACTTGATCGAGGGTTGTCGAAGCCATGGGAATCTGGAATTGGGGTATCAAGCTGCTGAGCAGTTACTAAGTCTCAAACCAAAAGATTCCGAA ACATATCTACTGTTGTTGAATTTGTACCTCAGTGCGGGGAAATTTAAAGATGTTTCTCGGGTGAAGGAGATGATGAAAGAAGAGAATGTTAGAAAGTTAA AAGACTGGAGCTGGATTAGTATCAAAGACAAAGTCTATTCATTTGAACCCAATGACAAGGCACATCCAGAGAGTTCACTACTATACAAGTCTTTGGAGGA TTTACTCGCCAAAGCAAAGAATATTGGATATGAAATGCTAGAAAGTGTGGGAATAAACGAGGAGGAGGAAAAGATATTGTCCCCTGCCGTTTATCACAGC GAGAAGTTGGCCATTACGTGTGGATTGGAGAAGTTGCCATATTCTTCAGCAGTGAGAGTTATGAAGAGTACCTTAATGTGCAGAGATTGCCATAATTTTA TTAAGTATGTCTCAACACTAACTGGTAGAGAAATCATTGTTAAAGATAGTAAGAGGCTTCACAAATTTGTTAATGGGCAATGCTCATGTGGGGATTTTGG TTGTTTTCTTTGATGTCATCTAAGTAGTAGCATCTAAAAGTGCATGAGATAGTTGGCTATCAAAAAGCTGATACATTTTTACACCTCTACACTAACACAT CACTTTCTGTATTTGATAAGTTCTAAATTATGATAGGAAGATAACTTTTAAATTGTGATTATAGGCCAAAGCTATTGTGGTCCTTGAAACTAAAATAAGC CCTATAATCAAATTTGTGTACCCCAACAAGGGCTACAATACATATATTTCACC
• Tissue: pods
• Gene name: LI_gene_125020;
• Additional information: details;

Expression of Ll_transcript_511036

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.3
• PS2: 0.1
• PS3: 0.3
• PW1: 0.7
• PW2: 0.9
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511036

• Blastp: Pentatricopeptide repeat-containing protein At2g27610 from Arabidopsis with 36.66% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g11290, chloroplastic from Arabidopsis with 35.61% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G27610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431389.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;