Ll_transcript_511037

• Id Trinity: TRINITY_DN28652_c0_g1_i2
• Name Transcript: Ll_transcript_511037
• Sequence: CTCAAATCTGAGACTTTGCTTAGTGAAATCAATCCTCCATCACACCAATAAATTGGTTGACAATGACATTGGATATCTATTCCCTTCCCTTGAACAATTT TCATCCAAGCAACTGAACAACATGATATTTCTGAAGTAACCCAATCAAGTTATGCAACCACTACTCAATTTCTTACATCATTGTTCCTCTTTCCTTCTTC CTTCATAGTCATATTCTGCCATGGCTTCTTTTCCTTCTGTTGCTATCACTCTAACTGCAACTCTCAAGCTCCACCCACAATTCAGAAAATACCCACCAAC CTCTTTTCCCATAGATAAGAGTCAAAGCCTTTCTTTGCAGAAAAACCACAGACTCACTCAATTTGAGCCCAGTAATTTGAATTTTCAGGAAGCACTTTCC TTTTCAAAAGAGAGGACAGAGGATGTAGAATCATCTTACTACTTTCCCTTGTTGCAAGAATGCTTAAAAAGAAGCTCCATTTCATATACAAAAGTTATTC ATGGTCATGTCACAAAAACTGGTACCCACGAAGATGTTTTTGTGATGTCATTTCTGGTCAATGTTTATGCCAAGTGTGGGAACATGGAGGATGCTCGCAA AGTTTTCGATAAAATGCCGAGGAGAAATGTGGTCGCGTGGAGCACATTGTTGGTGGGTTATGTGAAGAACTCGCAGCCAAAGCATGCTATCCATGTCTTT CATGAGATGTTGTATTCAGGAAGTTACCCTTCCAATTTCGCCCTTGCCATAGCTCTAAATGCTTGTACATCCTTGCACTCTTTAAAGTTAGGGGATCAGT TCCATGCTTACATAATCAAATACCATATTGACTATGACACCAGCATTGGCAATGCACTTTGTAGCTTATACTCCAGATCTCACAAACTAAAACTTGCTCT AAAAGCATTTAGGAGAATCGATGAGAAGAATGTTATTTCATGGACTACGGCTATTTCTGCTTGTGGTGACAACGGTGAAGCTATGAAGGGTTTGAATCTT TTTGTTGAGATGCTTTCTGAGGGCATACAGCCTAATGAGTTCACTTTAACTAGTGCCTTGAGCCAGTGTTGTGAGATTCTGTACTTAGAGCTTGGGACTC AGGTTCATTCGTTGTGTACTAAATTTGGCTACGACTTGAACCTGCGTGTTAGGAATTCTATGTTGTACTTGTACCTCAAATGTGGCTGTATCAGTGAGGC TCAAATTTTATTTCATGGAATGGATGATCTCAGTTTGGTTAGCTGGAACGCAATGATTTCAGGGCATGCACAAATGATGGAACTCGCAAAGGATAACCTT TCTTTATGCCAAAGTGGAAATGAAGCTCTCAACCTTTTCTCCAAGTTGAACCGGTCAGGCATGAAACCTGATCTATTTACCCTCTCAAGTGTCTTGAGTG TCTGTAGTAGACTGCTGGTTTTAGAGCAGGGGGAACAAATTCATGCTCAGGCCATTAAAACTGGTTTCTTGGCAGATGTGGTTGTGAGTACTTCACTAAT TAATATGTACAATAAATGCGGTAGCATCGAGAGGGCAAGCAAAGCTTTTCTAGAGATGTCTACTAGAACTATGATATCGTGGACTTCCATGATTGCAGGT TTTGCACTGCATGGCAGGTATCAGCAAGCATTGCAGCTTTTTGAAGATATGAGACTAGCAGGAGTTAGACCAAATGCGGTCACTTTTGTGGGTGTTTTAT CAGCATGTGGCCATGCTGGCATGGCCAGTGAAGCACTCGATTACGTCGAGATTATGCAAAAGGAATATAAAATTAAGCCTATGATGGACCATTATACTTG CCTGATTGATATGTTTGTGAGGTTAGGTCGGCTAGAGGATGCTTTTAATCTTATCAAGAAAATGGATTTCGAGCCTAGCGAGTTTATTTGGTCAAACTTG ATCGAGGGTTGTCGAAGCCATGGGAATCTGGAATTGGGGTATCAAGCTGCTGAGCAGTTACTAAGTCTCAAACCAAAAGATTCCGAAACATATCTACTGT TGTTGAATTTGTACCTCAGTGCGGGGAAATTTAAAGATGTTTCTCGGGTGAAGGAGATGATGAAAGAAGAGAATGTTAGAAAGTTAAAAGACTGGAGCTG GATTAGTATCAAAGACAAAGTCTATTCATTTGAACCCAATGACAAGGCACATCCAGAGAGTTCACTACTATACAAGTCTTTGGAGGATTTACTCGCCAAA GCAAAGAATATTGGATATGAAATGCTAGAAAGTGTGGGAATAAACGAGGAGGAGGAAAAGATATTGTCCCCTGCCGTTTATCACAGCGAGAAGTTGGCCA TTACGTGTGGATTGGAGAAGTTGCCATATTCTTCAGCAGTGAGAGTTATGAAGAGTACCTTAATGTGCAGAGATTGCCATAATTTTATTAAGTATGTCTC AACACTAACTGGTAGAGAAATCATTGTTAAAGATAGTAAGAGGCTTCACAAATTTGTTAATGGGCAATGCTCATGTGGGGATTTTGGTTGTTTTCTTTGA TGTCATCTAAGTAGTAGCATCTAAAAGTGCATGAGATAGTTGGCTATCAAAAAGCTGATACATTTTTACACCTCTACACTAACACATCACTTTCTGTATT TGATAAGTTCTAAATTATGATAGGAAGATAACTTTTAAATTGTGATTATAGGCCAAAGCTATTGTGGTCCTTGAAACTAAAATAAGCCCTATAATCAAAT TTGTGTACCCCAACAAGGGCTACAATACATATATTTCACC
• Tissue: pods
• Gene name: LI_gene_125020;
• Additional information: details;

Expression of Ll_transcript_511037

FPKM

• PAB: 1.7
• PNAB: 3.1
• PS1: 1.8
• PS2: 1.6
• PS3: 2
• PW1: 2.1
• PW2: 3.5
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_511037

• Blastp: Pentatricopeptide repeat-containing protein At1g11290, chloroplastic from Arabidopsis with 35.61% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g11290, chloroplastic from Arabidopsis with 35.61% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G11290)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431389.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;