Ll_transcript_277608

• Id Trinity: TRINITY_DN29229_c0_g1_i1
• Name Transcript: Ll_transcript_277608
• Sequence: GAAATGAGGAAAGAGTTCATCCCATAGTTTCGGGTACCCCATTCCCTTGAATCCTTCACATTCCCTTGAATCCTTCACATTCCCTTGAATCGAAATCCAA CTCAAGTTGAAAACGATGAAGCTGAGACTCAGATCTCTGGAATCCAAAGAAACCCTAAAACTCGATGTTCCCAATTCATATTCATTGCAGCAACTCAAAG AAACCATTTCTCGTCTCATCTCTTCTTCATCTTCATCTCCATCTCCTCCTTCTCCCTCTTCCTTTCATCTTTCTCTCAACAGGAACGATGAAATTCACGC TTCCTCGCCCAACGACTCGCTCGTTTCTATCGGAGTCACTAGCGGCGATCTCGTTTTCTACACTCTCAACCCCAACGCCTTTTCCCCTGAAACCCTAATT CACAAACCGGTGGATATCACTATGAGCGATGCTCCCTCAATTCCTGAACCTGAAAAGTTTCAAACTTTGGATGCTGCAGAAGCGAAAACCGCTGATTTGG TTAATGGGTCTGTTGAGGCGGTGACGGTTGAGAAGAGTAATTCCCAACCTTCGTTTCTGAAAAGGGTGCTTATTGATTCGATTGAGAATGATGTTAATGA TTTCAAGTTATTGGTATTTGCTGTTCATGCTGTTTTTCTGGAATCTGGGTTTGTTCGTGTTGATAAAGCTTTTAATATTCGACCTTCAGTGTCGGGTTCA ACGGTGTCGTTCAGGTATTCCTTGCCTGAGATTCTGATTAGTAGTTCGGATATTAAAACTGTGGTTTTGAAATTTCCAACGTTGGGGCATCTTGTGCATG TTTATGGGTCATTGTCTGATGTTCATGGCTCGGGGTTGCCCGAGGTTTGTTTAGACAAATGTAAATATGCTAGGCCCTTGGAGAATATGCTGAAGAATTC TGAATCTAAGGATGACCAATGTGAAAAAGAAATTTTTGAATTTTGGAAGATGGTAAAAGATAGGCTTGCTTTGCCACTTTTAATTGATCTTTGTGACAAG GCTGGATTGGACCCTCCACCGTGTTTTATGCGCCTCCCTTCGGAACTTAAGCTCAAGATTTTGGAGTATGTCCCTGGTGTCGATTTGGCGAAAGTGGCTT GTGTGAGCAGAGAATTGCGATATCTGTCCTCTACTAATGACTTGTGGAAGCTGAAGATTGAGGAGGAGTTTGGACAAATGGGGAGTGGAGGGAACTTTTC GAAGGACATGTTTGTTCTACATTGGGATTCTAAGAAGAAATCAGAACAAGTTCCTTTTCGAAGACATTTGCCTTGCGTGCTCAGATTCTCCACAGGAGCT TATCCCACTCCTTTTGGAGTAATTCCAATTGTGGGAGGAGAGTATGATTGGCTGCCAGGACATGGTCTATCATTACCTTCATACCCTCCAAGGCGGACTT TCCTTCCCCCATGTCATCGAGGGTTCGATAACTAGCCTGCTGACGAGTTCCTCTTCAATGATATTTGGTTGAGTGCTGTACTTGGACCAAATCCTTGGTA ATAATAGTGCACCTATTTTCTACTACTTTATGTCAGAAGACCTTGCCAGAGTGAATACAGCATAATTCATGAATGGCTGCTGGTTGTGAATAATGTTTAT GAAGATTAAATTTACGCCTTATTGTTTTGGTTATTAATTGTAAGCTGTAACTCCTTTGCAATTTATTTGCTTTGTTGGGTCGCAATTTTTGTGCTTTCTC CTTGGTTGCTATTACTGTAACTGTCATTTCAGCATAGCTTGTTTCAGAATAAATTTCTACGAGAATGTATGGAAGCTTCTACTGTGTACATGCTAGTATA GAGCATTACTGTTTCAATTTACAAATATTAAGTTTGCCAATCTTTAT
• Tissue: pods
• Gene name: LI_gene_125200;
• Additional information: details;

Expression of Ll_transcript_277608

FPKM

• PAB: 24.6
• PNAB: 18
• PS1: 17.7
• PS2: 12.1
• PS3: 17.4
• PW1: 15.5
• PW2: 19.2
• PW3: 15.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277608

• Blastp: F-box protein SKIP22 from Arabidopsis with 35.02% of identity
• Blastx: F-box protein SKIP22 from Arabidopsis with 34.62% of identity
• Eggnog: F-box protein(ENOG41121G7)
• Kegg: Link to kegg annotations (AT1G23780)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441530.1)
• Pfam: F-box domain (PF00646.32)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;