Ll_transcript_277614

• Id Trinity: TRINITY_DN29247_c0_g1_i2
• Name Transcript: Ll_transcript_277614
• Sequence: AGAGTTAGTCCCACGTAGATGTTACCAACTCAAATATGATTGACTCTGGTGCGAGGATTTACGTGAGAAACAAAAAAATATTGTAATAATAAGGTAAAAA AGAGATTTGTGACTACATCATATTATATGCATGAAGTTGAATATGAGTGAAGTTGGATATGAGCATTTCATCATTCAGCCAAAGCCAAGGCATAAAAGTT CAGCTTTAGTAAATCAATTGGTTAATGGTACCAAAACCATTGGTCATCTCAAACAAACACAAGCCCTCTTTCTCAAACTCCACTCTCAACCCAATCACTA CCATTACTTTTTGGGTCGTTTGCTACTACGGATTCTCCAGTTTCCGTCTGAACCCAATCTTGGTTATGCCCACCAAGTGTTTGATAAAATACCAAACTGC CAAAATAGCTTTCTCTGGACCTCACTTATTCGTTCAATTCTATCCAATGGCCAATTTCGCTGTTGCATTTCTACATATGCTAGAATGCACCAAAATGGGG TTTACCCATCTGGGTTCACCTTCTCCTCGGTCCTTAATGCTTGTGGACGAGTCCCTGCAAAATTTGAAGGGAAACAAGTGCATGCAAGGTTGGTGCAGTC AGGGTGTTTTGGAATCAAGATTGTGCAAACTGCGCTGCTTGACATGTACGCGAAATTCGGTTGTGTAATTGATGCACGATATGTCTTTGATAGAATGGGT GATAAAGATGTAGTTACGTGGACCGCGATGATTCGTGGGTATGCCAAGGTTGGAATGATGGATGAGGCACAGTGGCTCTTTGATAACATGGGAGAAAAGG ATACTTTTACTTTGACTACTATGGTTGCTGGATATGCTAATAAGGGTGACATGAAAGCTGCCAAGGAATTGTATGATGCCATGGATGAGAGGGACGCAGT ATCATCGGTTGCAATGATAGCTGGTTATGGAAAGTTTAGTGAGGTAAGTGAAGCCAGAAGGGTATTTGATGCTATACCGATGCCGCAGAATGCATCAACT TATGCAGCTATGCTTGCTTGCTATGCACAGAATGGATATGCAAATGAAGCTATTGACATATACAAGGAAATGAGACAGTTGAAGATTAAAATCACCGAGG TGGCAATGGCGGGTGCTATGTCAGCTTGTGCACAGCTTAGAGATATTAGAATGTCGAAAACATTGACCGACCATCTCGATGAGGGTTGTTGTGAAAGGAC ACATATTGTATCCAGTGCATTGATCCACATGCACTCAAAATGTGGAAATATTAACATAGCGCGGAGGGAATTCGGTAGAATGAAATACAAAGATGTGTAT GCTTACAGTGCAATGGTTGCAGCCTTTGCTGAGCATGGAAATTCACAGGATGCAATAGATCTTTTCTCAAAGATGCAAAAGCAAGGATTAAAGCCAAACC ATGTTACATTCATTAGTGTCCTCAATGCATGTAGCTCTTCAGGTCTTATCGAAGAAGGTTGCAGGTTTTTCCGGATTATGACCGAGGTATATGATATCGA TCCTTTACCTCAGCACTATGCTTGCATGGTTGATATGCTTGGTAGGGCTGGCCAACTAGAAAGGGCATACAGCATCATAAAGGAGAATGCATCTAAGGCT GATGCAACAACTTGGAGTTCTTTATTAGCAAGTTGCAGGCTTTACGGCAATGTCGAGTTAGGCCAAATTGCGGCTAGACATCTCTTTGAGATTGAACCTG AGGACTCTGGAAATTATGTGCTTCTAGCAAATACTTATGCATCAAAGGCTAAATGGGAGTGTGCAGAAGAAGTTAAGATGATGATGAGTGAAAAGGGGAT GATAAAACCTTCAGGGTATAGTTGGATACAAAGTAACACTAGAGGACACTATATGAAGAAGCATTTTGATTGTTAATTTGATGTGAATAATGCCTTTTTA CATGCCCACTTCAACTTAGGATATTTACATCACTCAACATCATTCTCAATATCCTCATCATATGTGTAACTCACAATTATACTATATTTGGCTTAAAATT GCATAGCAGATATGTTGAAAAACAATGGGAATCGTAAAATAATAGTGCA
• Tissue: pods
• Gene name: LI_gene_125206;
• Additional information: details;

Expression of Ll_transcript_277614

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.6
• PS2: 0.3
• PS3: 0.5
• PW1: 0.5
• PW2: 0.5
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_277614

• Blastp: Putative pentatricopeptide repeat-containing protein At5g37570 from Arabidopsis with 35.8% of identity
• Blastx: Putative pentatricopeptide repeat-containing protein At5g37570 from Arabidopsis with 35.8% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G37570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453209.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;