Ll_transcript_433008

• Id Trinity: TRINITY_DN29303_c0_g1_i1
• Name Transcript: Ll_transcript_433008
• Sequence: CCCTTCTCTCCTCAACTTCAATCCCTTTCCCTTTCTTTTTCTTCTTGACAATAACAAACCAAAAGAAAAAAACACCACTTCATCTTCTTCCTCTTCTAAA AATCTATGATCATGGCACCTTCTTCTATATCACTCAACTCTAATATATGGGCTAAACCTCAACTCCCTCATGCTCTCTTTTCATATTCTTCATCAATATT TGATTTGGGCTTCCCTACAAAATCCACCATCACCTTGAAGATGAAGCCCATTACAAAACCAAATAATGCAATTCAGTGTGCTCTACACACTCATCCAGTA TTCAATTTCCCAAAACAACCCTACAACAAAACCTTAATTACCAAAGAAAAAACACTCCCAGACACAGACACAAAAACTGAGACACACAATCCCACTACGC CACTTCGGAACCCATTCCAAAGAGTTGCAGCAACGGCACTAGACATGTTCGAGAGCGCGTTACTCTCACGCGAGCAAAATCAACCCCTTCCCAAGACCAC CGATCCACGTGTCCAAATCTGCGGTAACTTCGCTCCAGTTCCAGAACAACCTGTTACTCATTCACTCCCAGTAACTGGAACAATTCCCGAAGCCGTTAAC GGCGTCTACCTCCGTAACGGTGCGAACCCAATGTTCGAGCCAACCGCAGGGCATCACCTCTTCGACGGAGACGGAATGGTCCACGCCGTTACTATCAATG ACGGCGCCGCTAGTTATGCTTGTCGCTTCACCGAAACGGAGAGGTTGGTCCAAGAAAAGAAGCTTGGCCGTGCGATGTTTCCCAAAGCAATCGGAGAACT TCACGGTCACTCTGGAATTCTCCGATTGCTCTTGTTTTACGCTCGTGGACTCGCCGGAATCGTTGATCACCGACACGGTGCTGGAGTTGCCAACGCCGGG TTAATCTTCTTCAACGGAAAACTCCTTGCTATGTCGGAAGATGACTTACCTTACGAGCTTCAAATCACTTCCTCCGGTGACTTGAAAACCGTTGGCCGTT TCAACTTCTCTGGACAACTCAATTCCGCCATGATTGCTCATCCAAAGCTCGATCCAATTTCCGGGGAACTTTTCGCACTGAGCTACGACGTCACAAAGCC TTATTTAAAATACTTCCGGTTCTCGCCGGAAGGTGAAAAATCACCGGACGTGGAAATTCGCCTCTCCGTTCCCACCATGACACATGATTTCGCAATCACG GAGAATTTCGTTGTAATCCCAGATCAACAGGTTGTATTCAAGTTACCGGAGATGATAAAAGGAGGCTCTCCAGTGAAATATGACGGCGCAAAGAAATCAC GGTTCGGAATTCTACCAAAATATGCGAAAGACGAAAGCAGTGTTATATGGGTTGAGGCTGAAGACACGTTCTGTTTTCATTTCTGGAACGCGTGGGAAGA AACTGAAACCAATGAAGTTGTAGTTATCGGATCTTGCATGACGCCACCTGATTCAATATTCAACGAATCAGATGAACATTTGAAGAGTGTGTTATCTGAA ATAAGGTTGAATTTGAAAACAGGTAAATCCACGCGCCGTTCTATAATTCCTGAAATTAATGGACACGTAATGAACCTTGAGGTTGGAATGGTGAACCGGA ACCGACTCGGGAGAAAAACCCGGTTCGCTTACTTAGCTATCGCTGAACCTTGGCCTAAGATTTCCGGTTTTGCTAAAGTAGATTTGTTAACCGGAGAATT GAAGAGCCATAACTATGGTGATAATAGATATGGCGGTGAACCGTTTTTTTTACCAAAAAATGATGATTTTTGTGAAGAAGATGATGGGTACATTTTGGCT TATGTTCATGATGAGAGTACGTGGGAATCGGAGTTGCAAATAGTGAATGCGATGGATTTGAAGGTGGAAGCTACGGTGAAATTGCCATCTAGGGTACCCT ATGGTTTTCATGGCACTTTTGTGGAAGCTAAGGATTTAGCAAAGCAGTCACAAACCTTGTCCCACACCAAACGAGATTGTTAATATTTCTTTATTACCCT ATAAAATAATAGCGTAAGATGGTAAAAAGGGGTCATGAAAAGGGTTAACACTCACCATAGATTTTGTTGGTATTATTGTAGGTTCCTATATCTATGTTTT CAGGAATCAGCTTGTAGCTTTGAACTCTGTAGTTGCATGGAAGCTCAGCTGCTTTCTGTTTCTTTTATTTTTCTTTTCTAATATAATAATAGTTTTTCTT CTATTTTATTTAAGAATACTCTTTCATTTCCCCCCTTTAGTTCTGTCGTTTGAGACATCATATCATCGTACTAGCTCTGCAGTCTGGTCTGCATACCTTG TTTTTGTTTCAATAATATTATATTAAAAAGAAACAGC
• Tissue: pods
• Gene name: LI_gene_125216;
• Additional information: details;

Expression of Ll_transcript_433008

FPKM

• PAB: 11.5
• PNAB: 9.7
• PS1: 2.6
• PS2: 18.5
• PS3: 10.5
• PW1: 5.2
• PW2: 12.7
• PW3: 12.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_433008

• Blastp: Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 66.61% of identity
• Blastx: Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic from Arabidopsis with 64.72% of identity
• Eggnog: dioxygenase(COG3670)
• Kegg: Link to kegg annotations (AT1G30100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462498.1)
• Pfam: Retinal pigment epithelial membrane protein (PF03055.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;