Ll_transcript_435579

• Id Trinity: TRINITY_DN31148_c0_g1_i1
• Name Transcript: Ll_transcript_435579
• Sequence: AAAAATTAAATATTCTTTATTTTTTTCTGTTTTGTTTTAATATCATTGGCCCGAGATATATTTTTATTTGGGACATCTGATATTTGTCCATTGAAAACAG ACAAAAATATGCCTATAATACTCACGTTACCATCCAATTACCATCCAATCAAGGCATAGTCTATGGTCAGAAAGATGCTATACATTTTCCTTTTCTATCT TATCATTGTAGAATTTCTTTGCATAAACATTCGTTTCCTTAACACTTCTGCTTTTTACTCTGTTTGCTAAATGGATTTTCACAGTAGAAAACTGCTGCAT CAGCATCATTACCATGCTTCCACCATGGCTGCTAGTCCAACACCTTCTCCTTCCCCTCTTGAATCACTGCCACAGAAACCGGAAGCATGGCTTCCTGTCT CCGATTTCATCGGCGGGGAAGATATAACAAACCATAACCATGTTCATTTACTTCAAGTAGCTTTGATTGTTATGGCTTGCATGGTTGGCATGTTTATGTC TCTTTGCAGCATGTCCTTAATCTTAAAGCACTATTACTCAAGAAGACTCAATCATAACAACAACAGAACAAGAAACTCGCCTATATTGTTCCATGTGAAT GGAAACTCAGGTGTTGTTTCAGATAATGATGAGGGACCAATGGTTGAGCACCCTATATGGTTTATCCGCACAGAGGGTCTTCAACAATCACTGATAGATT CCATCACGGTTTTCAAATATGTAAAAGAAGAAGGGCTAATAGATGGGACACTGTGTTCTGTTTGCCTCGGCGAGTTTGAACAACAAGAGAGTCTAAGACT CTTGCCTAAGTGCAGCCACGCATTTCATATTCCTTGCATTGATACTTGGTTAAGATCACATAAGAATTGCCCCTTGTGTCGCGCCCCTGTGGTTCATGAC GCTGGTGCTAATGGTAGTGGCACTGCTGTGAGTGCCACTGAGACAGATACAAGCACTTTAGGTCAGAATCATGTGGAGAACATGAGTGGTACTAATGAGG AAGAAATGGGAACTAGTCATGTAGTAGAAAGTGAGAGTAGCACATTGAGGATTGAAAATGATGACTCAGAAGGAGGAGATATTGAAATTCCAGATAAGAT GGTGTCTAATTCTGACAAGATAAATTTCCATGCTTTAGAAGTGGAAATACAACACATGATGAGGTCAATGTCCATGGATTCTTCTTCTGTTCCTTTGGTA TTTACTGATGTGGTGGGTTTAAATTGTGATGCAGAAGGCTCAGCCACAAGCTTACATGGCAAAATCAATTCAGGTAACAAGGATATGCTTATTGCTAAGC AGGGTAGTGGCAGTGGAAGTTCAACTATTTACAAACAGGCTTCAATTCGGCATGCATTTCAGAAAAAGCCTATTTCATTGAGAGGGTCTTTTTCACATAA CACAAAATTGTTATTTTCTAGACATTGTAGGAGCCAGAGCTCAACCCTTCCCTTGTAAACTATAAGTACTAGGGAAATATACCAACAAAATCTTCAGGTC CTAGCATGGCAGGGTCAAGTTAAAAAATTTAAGAGGACAATTGGGTAGGAGTATGGTAGTTTATCCAAATCAGTAAACTATATATTTCTGCCTTTCAAAA CAGACAGCAATAATATGGTTAGTATAGTTTCTGCAACAATATGGTATTATGGTTATATCATCCTATGTTTTTAAACATTAAGAGTAATAAACATTATATT CTACTGATAGTCAATGTCATTAAAATACAGCTTACTTTAAGTAAGGAAAGAGTTGAACCACAAATATATAGGAACAGACCAATTCAATTATCAGTTGACA GCATGCGAGGATTTACACAAAAATAGAAACTGAATCAATCAAGGAGTTGGCAGGAGATAAAAGATTCAAATAAAGATTTATCTTCTCTTGTATTTTATAT ATTTGTAATCTTATCTTTATTTTGTAATGTTTCACCTTTGTACTCCTCAGTTATAGGATTGTTGTGGTCTATATAAACTTATAAAAGAAACATTGTCTGA ACCCCCTAGTTCAATATTAATATGGTGTTTCCTGATAAATCTATCATCAAAACAATTTAGTTGCTCTCTTTCAGTATACAATTGAAG
• Tissue: pods
• Gene name: LI_gene_125748;
• Additional information: details;

Expression of Ll_transcript_435579

FPKM

• PAB: 13.1
• PNAB: 1.9
• PS1: 3.5
• PS2: 0.1
• PS3: 0.1
• PW1: 16.3
• PW2: 10.4
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_435579

• Blastp: RING-H2 finger protein ATL54 from Arabidopsis with 37.39% of identity
• Blastx: RING-H2 finger protein ATL54 from Arabidopsis with 47.56% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT1G72220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462623.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;