Ll_transcript_394835

• Id Trinity: TRINITY_DN32440_c0_g1_i1
• Name Transcript: Ll_transcript_394835
• Sequence: CTCTTTTGCTTTGCTTTGCTTAAAAGCTGCTTACAGAGAGTGTGAAGACAAGTGACATAGAAGTTTCGTTGTTATGGGTCAATTTACATTTAGAATGAAT GCATAAGGTTTATATTTTTCTTGTTTTTTTGCATATCAAGTTGTTTGTCTTATAATATAAAAGTTATAAATCTCAAAAATAGTCTATTCGCTTACAAAAA TATGTATATCCATGAGCCTCGTGCGGGTATTGTAAGCTGTAAGCAGAAGCACACATGAAAGTTGTTCTCTTCAACCCACGAAACAAAACACATTATCATC TATGAATCTATCCTTAACTAGAACATTACATAACCTGAAACAACTTCAATGGACAAGAACTCAATCCTTCCACCAAAAACTCCATGATCTACTTAACCAA TGCACCAACCTAATCCACCTTCAACAAATCCAAGCTTTGATGCTCACAACAGCTCTTGATAAAGACAACATTCTCCTCTCTCAACTCATCCACACTTCAG CTTCTCTTGGCTACCCTTCTTTCTCTTATTCTCTTTTCACTTACAATCACAGACCCAACATTTTCCTATATAACAACACCATTTGGGCTCTCTCCAAATT CAACGCCCCATGTGCTGTTTTGTTGTTTAACAGAATTCGGTTACTTGGGTTGAGGCCTGATAACTACTCTTTCCCTTTTGTTTTGAGAGCTGTTGTTCAC TTATTGGATGATGTTGTTGGTAGACAGATTCATTGTCAAGCTGTTTCTTGTGGGTTGGATTCGGATCGCAGTGTTGTTACGTCGCTTGTTCAGATGTATT GCTCTTGCTTGCATGTTTCTCATGCACGGAAGCTGTTCGATGAAAGTACTGCTAAATGTGGTTTGCTTTGGAATGCTATGATTGCAGGTTATGCTAAACT CGGGGATATGGCCAATGCCCGTAGCTTGTTTGATTGTATGCCTGGAAAGGATAAGGATGTTGTTTCATGGACTGCAGTTATTTCAGGTTACACACAGGCT GATAATCCGAATGAGGCCATTGCACTGTTCCACAGAATGCAGCTTCATAATGTGAATCCAGATGAAATTGCGATTTTGGCTGTGCTCTCTGCCTGTGCTG ATTTAGGTGCTCTTGAGTTAGGGGAGTGGATTCACAATTACATTGAGAAGCATAAGTTGCATAAGATTGTCCCTCTTTGCAACTCTCTTATAGATATGTA TGCAAAGTCAGGTAACATAAGTAAAGCACTAGAAGTGTTTAAGAATATGAGGAATAAAACAATAATAACATGGACAACAATGATTGCTGGACTTGCTTTA CATGGTCTAGGAAAGGAGGCCCTTGGTATATTTTCTTGCATGGAAAAGGCAAGAGTGAAGCCAAATGAAGTCACATTTATTGCTGTCCTTTCTGCTTGTA GCCATGTTGGATTGGTTGAAATAGGCCATGATTATTTCGCATCGATGAAGTCCAAATATGGAATTGAACCAAAGATTGAGCACTATGGCTGCATGATTGA TTTGCTTGGGCGTGCTGGCTATATTCAAGAAGCAAAGGAACTTGTTAGGTTGATGCCCTATGAAGCGAACGCAGCTGTATGGGGATCTCTTCTTGCTGCT TCAACTAGATGTGGTGATGCTGGGCTTGCAGCTGAAGCTTTGGATAATTTAATCATGTTGGAACCCCATAATAGTGGGAACTATTCACTCTTATCCAATA CGTATGCTGCACTTGGTAGGTGGAGTGAATCTCGGATTGTGAGGAAGGTTATGCGGAATGCAGGTGTGGAAAAGAAGCCTGGTGTGAGTTTTATTGAGGT GAACAACAGAGTATATGAATTCATCGCTGGCGACAAGTTAGACGTGTCATTTGTTGGCACATTTGATGTCCTACATAGCATAAGTGAGCAACTGAAGATG GTTTGTCTGAAAACGGCACATAGAGGACCACTAGATGTTGATGACTGATGTATATCACTGTACATATCCCAATTCCATTTAAAATACTGCATTTGTCCTT CTTGTTGAGTACAAGCCGAAAAGATATCCCTTTTGAGCATCAGTGAGCAACAACTCCTATCTTTTCCCTGTTAAGGCAAGTAGTTCCTTTTCTTATTGGT AAGTAGTAATGGCAAGATAAGGGTGTGTATATTTTACCTTCCCCAGACCTCCTCATTAGGTGGGAGTTTCATGCACTAAGCCGCCCTAGACAACAATGCC ATGAAGGATGCCTTGGCAGGACTCATGTGCAACAGAGCGAAGCGTGGTGATATGTAATTGAAAACCTACATCACTGGCTGACGAGTTTATAATCTGTGTC ACCAGCTATATCAAAGTGATAGTGGTAACTTCTCTAACTGCATGTATCCGCTATTATTGATGGCCTTCTAATAATCTAGTTTGCCACTATTCCTTTT
• Tissue: pods
• Gene name: LI_gene_126159;
• Additional information: details;

Expression of Ll_transcript_394835

FPKM

• PAB: 0
• PNAB: 2.3
• PS1: 3.1
• PS2: 1.7
• PS3: 2.1
• PW1: 1.2
• PW2: 1.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_394835

• Blastp: Pentatricopeptide repeat-containing protein At5g56310 from Arabidopsis with 50.9% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g56310 from Arabidopsis with 50.9% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G56310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420700.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;