Ll_transcript_394836

• Id Trinity: TRINITY_DN32440_c0_g1_i2
• Name Transcript: Ll_transcript_394836
• Sequence: CAAGAACGATGATACTTGTTGAGGGTGAGGCTCGGCGCAATGGTAAAGTTGCCTGCCTACTGGCCTAGAGGATGATCCTAGAAACAGACTCTTCGGTTGC GAGGGTAATATTGTGTTATGCTAAACTCGGGGATATGGCCAATGCCCGTAGCTTGTTTGATTGTATGCCTGGAAAGGATAAGGATGTTGTTTCATGGACT GCAGTTATTTCAGGTTACACACAGGCTGATAATCCGAATGAGGCCATTGCACTGTTCCACAGAATGCAGCTTCATAATGTGAATCCAGATGAAATTGCGA TTTTGGCTGTGCTCTCTGCCTGTGCTGATTTAGGTGCTCTTGAGTTAGGGGAGTGGATTCACAATTACATTGAGAAGCATAAGTTGCATAAGATTGTCCC TCTTTGCAACTCTCTTATAGATATGTATGCAAAGTCAGGTAACATAAGTAAAGCACTAGAAGTGTTTAAGAATATGAGGAATAAAACAATAATAACATGG ACAACAATGATTGCTGGACTTGCTTTACATGGTCTAGGAAAGGAGGCCCTTGGTATATTTTCTTGCATGGAAAAGGCAAGAGTGAAGCCAAATGAAGTCA CATTTATTGCTGTCCTTTCTGCTTGTAGCCATGTTGGATTGGTTGAAATAGGCCATGATTATTTCGCATCGATGAAGTCCAAATATGGAATTGAACCAAA GATTGAGCACTATGGCTGCATGATTGATTTGCTTGGGCGTGCTGGCTATATTCAAGAAGCAAAGGAACTTGTTAGGTTGATGCCCTATGAAGCGAACGCA GCTGTATGGGGATCTCTTCTTGCTGCTTCAACTAGATGTGGTGATGCTGGGCTTGCAGCTGAAGCTTTGGATAATTTAATCATGTTGGAACCCCATAATA GTGGGAACTATTCACTCTTATCCAATACGTATGCTGCACTTGGTAGGTGGAGTGAATCTCGGATTGTGAGGAAGGTTATGCGGAATGCAGGTGTGGAAAA GAAGCCTGGTGTGAGTTTTATTGAGGTGAACAACAGAGTATATGAATTCATCGCTGGCGACAAGTTAGACGTGTCATTTGTTGGCACATTTGATGTCCTA CATAGCATAAGTGAGCAACTGAAGATGGTTTGTCTGAAAACGGCACATAGAGGACCACTAGATGTTGATGACTGATGTATATCACTGTACATATCCCAAT TCCATTTAAAATACTGCATTTGTCCTTCTTGTTGAGTACAAGCCGAAAAGATATCCCTTTTGAGCATCAGTGAGCAACAACTCCTATCTTTTCCCTGTTA AGGCAAGTAGTTCCTTTTCTTATTGGTAAGTAGTAATGGCAAGATAAGGGTGTGTATATTTTACCTTCCCCAGACCTCCTCATTAGGTGGGAGTTTCATG CACTAAGCCGCCCTAGACAACAATGCCATGAAGGATGCCTTGGCAGGACTCATGTGCAACAGAGCGAAGCGTGGTGATATGTAATTGAAAACCTACATCA CTGGCTGACGAGTTTATAATCTGTGTCACCAGCTATATCAAAGTGATAGTGGTAACTTCTCTAACTGCATGTATCCGCTATTATTGATGGCCTTCTAATA ATCTAGTTTGCCACTATTCCTTTT
• Tissue: pods
• Gene name: LI_gene_126159;
• Additional information: details;

Expression of Ll_transcript_394836

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.1
• PS2: 0
• PS3: 1.5
• PW1: 0.4
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_394836

• Blastp: Pentatricopeptide repeat-containing protein At5g56310 from Arabidopsis with 54.99% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g56310 from Arabidopsis with 54.99% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G56310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420700.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;